RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 A0A0G2JK05 382 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 D6RAR5 112 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 FTCDNL1E5RQL4 147 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 ADAM10O14672 748 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 TP53I11O14683 189 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 ARHGEF9O43307 516 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 NCR1O76036 304 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 IGHEP01854 428 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 FBXO45P0C2W1 286 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 EPXP11678 715 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 ELK1P19419 428 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 SRMP19623 302 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 ALOX5APP20292 161 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 AZGP1P25311 298 aaKnown RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 GRPRP30550 384 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 RFX2P48378 723 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 EIF2B2P49770 351 aaKnown RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 CCR9P51686 369 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 RPS11P62280 158 aaKnown RBP eCLIP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 MC2RQ01718 297 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 ALKBH1Q13686 389 aaKnown RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 TAB1Q15750 504 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 TOMM34Q15785 309 aaPredicted RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 EXT1Q16394 746 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 PHF19Q5T6S3 580 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 KCTD18Q6PI47 426 aaPredicted RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 HDDC2Q7Z4H3 204 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 UBQLNLQ8IYU4 475 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 OR6V1Q8N148 313 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 ZBTB8BQ8NAP8 495 aaPredicted RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 ADPRHL1Q8NDY3 354 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 OR2I1PQ8NGU4 316 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 ZPLD1Q8TCW7 415 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 HPS1Q92902 700 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 MOV10Q9HCE1 1003 aaKnown RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 SRA1Q9HD15 236 aaKnown RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 ACOXLQ9NUZ1 547 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 RBFOX1Q9NWB1 397 aaKnown RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 AKAP7Q9P0M2 348 aaPredicted RBP12.26□□□□□ -0.45
LIMS1-205ENST00000410093 PISDQ9UG56 409 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 SPATA2Q9UM82 520 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 B3GALT5Q9Y2C3 310 aa12.26□□□□□ -0.45
LIMS1-205ENST00000410093 SPTBN2O15020 2390 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 CPAMD8Q8IZJ3 1885 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 CNOT1A5YKK6 2376 aaKnown RBP12.25□□□□□ -0.45
LIMS1-205ENST00000410093 C9J4A7 227 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 UBL3O95164 117 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 TIAF1O95411 115 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 SPNP16150 400 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 ADH6P28332 368 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 MAP2K3P46734 347 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
LIMS1-205ENST00000410093 ZFP36L1Q07352 338 aaKnown RBP12.25□□□□□ -0.45
LIMS1-205ENST00000410093 PUDPQ08623 228 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 INSL4Q14641 139 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 ACKR1Q16570 336 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 NTRK2Q16620 822 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 Q499Y3 187 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 GXYLT1Q4G148 440 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 LRRN1Q6UXK5 716 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 RPTNQ6XPR3 784 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 H1FNTQ75WM6 255 aaPredicted RBP12.25□□□□□ -0.45
LIMS1-205ENST00000410093 YIPF7Q8N8F6 280 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 SAMD12Q8N8I0 201 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 OR5AK2Q8NH90 309 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 OTOSQ8NHW6 89 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 TRMT10AQ8TBZ6 339 aaKnown RBP12.25□□□□□ -0.45
LIMS1-205ENST00000410093 ZNRF4Q8WWF5 429 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 NXPE2Q96DL1 559 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 C7orf50Q9BRJ6 194 aaKnown RBP12.25□□□□□ -0.45
LIMS1-205ENST00000410093 PPP4R1LQ9P1A2 415 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 ITGB1BP2Q9UKP3 347 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 B9D1Q9UPM9 204 aa12.25□□□□□ -0.45
LIMS1-205ENST00000410093 B4E171 279 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 CTDSPLO15194 276 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 UPK3AO75631 287 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 SERPINI2O75830 405 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 ABHD16AO95870 558 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 EIF1P41567 113 aaKnown RBP12.24□□□□□ -0.45
LIMS1-205ENST00000410093 TSPAN7P41732 249 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 CASP3P42574 277 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 HCCSP53701 268 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 FBXW4P57775 412 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 ROM1Q03395 351 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 GLO1Q04760 184 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 FOXC1Q12948 553 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 LIPNQ5VXI9 398 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 SLC18B1Q6NT16 456 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 PLET1Q6UQ28 207 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 SHISA6Q6ZSJ9 500 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 CDH24Q86UP0 819 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 NR2C2APQ86WQ0 139 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF511Q8NB15 262 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 ELP5Q8TE02 316 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 SLC25A43Q8WUT9 341 aaPredicted RBP12.24□□□□□ -0.45
LIMS1-205ENST00000410093 SLC25A36Q96CQ1 311 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 FRMD6Q96NE9 622 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 DEFB126Q9BYW3 111 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 C11orf54Q9H0W9 315 aaPredicted RBP12.24□□□□□ -0.45
LIMS1-205ENST00000410093 SYT4Q9H2B2 425 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms