RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 ZNF346Q9UL40 294 aaKnown RBP20.9■□□□□ 0.94
UBE2E3-202ENST00000410062 SAMHD1Q9Y3Z3 626 aaKnown RBP20.9■□□□□ 0.94
UBE2E3-202ENST00000410062 SEC14L2O76054 403 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 CST1P01037 141 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 IGHG1P01857 330 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 ACADSP16219 412 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 HOXC12P31275 282 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 RPL4P36578 427 aaKnown RBP20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 CLRN1P58418 232 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 TBRG1Q3YBR2 411 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 SYT14Q8NB59 555 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 OR9Q2Q8NGE9 314 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 NRGNQ92686 78 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 BCL2L2Q92843 193 aaPredicted RBP20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 C1QTNF6Q9BXI9 259 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 NELFAQ9H3P2 528 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 NGBQ9NPG2 151 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 IL20RAQ9UHF4 553 aa20.89■□□□□ 0.94
UBE2E3-202ENST00000410062 NPIPB13A6NJU9 1138 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 NPIPB4C9JG80 1138 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 TRMUO75648 421 aaKnown RBP20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 IFNGR2P38484 337 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 SH3BGRP55822 239 aaPredicted RBP20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 RPL27P61353 136 aaKnown RBP20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 ERVK-25P63136 954 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 C1orf146Q5VVC0 180 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 C1orf94Q6P1W5 598 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 PGBD2Q6P3X8 592 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 ANKRD16Q6P6B7 361 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 NOXO1Q8NFA2 376 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 SLCO4A1Q96BD0 722 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 TSPAN32Q96QS1 320 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 KATNB1Q9BVA0 655 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 MRPL13Q9BYD1 178 aaKnown RBP20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 ADAM18Q9Y3Q7 739 aa20.89■□□□□ 0.93
UBE2E3-202ENST00000410062 TEX15Q9BXT5 2789 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 NAV2Q8IVL1 2488 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 PDZD2O15018 2839 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 ZNF99A8MXY4 864 aaPredicted RBP20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 NDUFB2O95178 105 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 IGHMP01871 453 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 ACVR1BP36896 505 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 FXYD6P3P58550 94 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 MYBPC1Q00872 1141 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 LRFN4Q6PJG9 635 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 KLHL24Q6TFL4 600 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 THSD4Q6ZMP0 1018 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 HDDC2Q7Z4H3 204 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 GNPDA2Q8TDQ7 276 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 HDAC2Q92769 488 aaKnown RBP20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 UTP4Q969X6 686 aaKnown RBP20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 BOD1Q96IK1 185 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 AMDHD2Q9Y303 409 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 SPG11Q96JI7 2443 aa20.88■□□□□ 0.93
UBE2E3-202ENST00000410062 AKAP6Q13023 2319 aa20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 FKBP6O75344 327 aa20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 CCNB2O95067 398 aa20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 QDPRP09417 244 aa20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 FPR3P25089 353 aa20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 ZNF83P51522 516 aa20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 TAF11Q15544 211 aa20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 HIST3H3Q16695 136 aa20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 CCM2LQ9NUG4 571 aaPredicted RBP20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 POFUT2Q9Y2G5 429 aa20.87■□□□□ 0.93
UBE2E3-202ENST00000410062 CD14P08571 375 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 HOXB6P17509 224 aaKnown RBP20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 GSSP48637 474 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 IST1P53990 364 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 NR1H2P55055 460 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 TUBA1BP68363 451 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 TUBA4AP68366 448 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 ZNF770Q6IQ21 691 aaPredicted RBP20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 TUBA1AQ71U36 451 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 SSX8Q7RTT4 187 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 CLDN22Q8N7P3 220 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 ZNF519Q8TB69 540 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 MCHR2Q969V1 340 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 NDEL1Q9GZM8 345 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 LIME1Q9H400 295 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 ESRP2Q9H6T0 727 aaKnown RBP20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 STX18Q9P2W9 335 aaKnown RBP20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 MAST4O15021 2626 aa20.86■□□□□ 0.93
UBE2E3-202ENST00000410062 DPRXA6NFQ7 191 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 GNGT2O14610 69 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 PLAUP00749 431 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 GASTP01350 101 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 UBE2NP61088 152 aaKnown RBP20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 BSPH1Q075Z2 132 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 MICAQ29983 383 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 NCMAPQ5T1S8 102 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 SMARCD3Q6STE5 483 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 LINC00471Q8N535 108 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 PAPD5Q8NDF8 572 aaKnown RBP20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 FANK1Q8TC84 345 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 MAGEE2Q8TD90 523 aaPredicted RBP20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 Q96M85 177 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 KCNK17Q96T54 332 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 FOXB1Q99853 325 aa20.85■□□□□ 0.93
UBE2E3-202ENST00000410062 YY1AP1Q9H869 796 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms