RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TFAP2EQ6VUC0 442 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 ADCK1Q86TW2 530 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 LIX1LQ8IVB5 337 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 CNEP1R1Q8N9A8 125 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 POMGNT2Q8NAT1 580 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 HDAC2Q92769 488 aaKnown RBP13.46□□□□□ -0.25
LSM5-207ENST00000410044 ZNF566Q969W8 418 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 APH1AQ96BI3 265 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 NMD3Q96D46 503 aaKnown RBP13.46□□□□□ -0.25
LSM5-207ENST00000410044 ZNF570Q96NI8 536 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 MBOAT4Q96T53 435 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 SLCO5A1Q9H2Y9 848 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 VCXQ9H320 206 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 TOR3AQ9H497 397 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 CMC2Q9NRP2 79 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 FAM118AQ9NWS6 357 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 KLHL21Q9UJP4 597 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 PROCRQ9UNN8 238 aa13.46□□□□□ -0.25
LSM5-207ENST00000410044 SMG1Q96Q15 3661 aaKnown RBP13.46□□□□□ -0.26
LSM5-207ENST00000410044 TEX13CA0A0J9YWL9 993 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 WIPF3A6NGB9 483 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 RPL36A-HNRNPH2H7BZ11 118 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 DVL2O14641 736 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 IGHG1P01857 330 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 HIST1H1CP16403 213 aaKnown RBP13.45□□□□□ -0.26
LSM5-207ENST00000410044 EDNRAP25101 427 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 CDKN2AP42771 156 aaKnown RBP13.45□□□□□ -0.26
LSM5-207ENST00000410044 SIRPAP78324 504 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 CAMK2DQ13557 499 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 KRR1Q13601 381 aaKnown RBP13.45□□□□□ -0.26
LSM5-207ENST00000410044 STK11Q15831 433 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 ZIK1Q3SY52 487 aaPredicted RBP13.45□□□□□ -0.26
LSM5-207ENST00000410044 MESTQ5EB52 335 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 TSPO2Q5TGU0 170 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 TMEM236Q5W0B7 351 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 FBXW9Q5XUX1 488 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 XKRXQ6PP77 449 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 CASP12Q6UXS9 341 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 MRGPRGQ86SM5 289 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 CCDC71Q8IV32 467 aaPredicted RBP13.45□□□□□ -0.26
LSM5-207ENST00000410044 ZNF100Q8IYN0 542 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 LILRB4Q8NHJ6 448 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 PITX2Q99697 317 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 TEX12Q9BXU0 123 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 RIBC2Q9H4K1 309 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 GLTPQ9NZD2 209 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 COQ3Q9NZJ6 369 aa13.45□□□□□ -0.26
LSM5-207ENST00000410044 VSX1Q9NZR4 365 aaPredicted RBP13.45□□□□□ -0.26
LSM5-207ENST00000410044 NDRG4Q9ULP0 352 aaKnown RBP13.45□□□□□ -0.26
LSM5-207ENST00000410044 PRSS37A4D1T9 235 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 A8MXE2 369 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 H0YAE9 185 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 XKRYO14609 159 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 SURF4O15260 269 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 NR2C1P13056 603 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 NOS3P29474 1203 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 VHLP40337 213 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 TOP3AQ13472 1001 aaPredicted RBP13.44□□□□□ -0.26
LSM5-207ENST00000410044 SLC25A35Q3KQZ1 300 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 THEM4Q5T1C6 240 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 BEND4Q6ZU67 534 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 PTCHD4Q6ZW05 846 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 IQCF1Q8N6M8 205 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 ZNF610Q8N9Z0 462 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 RELL2Q8NC24 303 aaPredicted RBP13.44□□□□□ -0.26
LSM5-207ENST00000410044 NPEPL1Q8NDH3 523 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 NOXO1Q8NFA2 376 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 OR52E2Q8NGJ4 325 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 RASD2Q96D21 266 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 RBP7Q96R05 134 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 C12orf49Q9H741 205 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 SLC7A10Q9NS82 523 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 MALT1Q9UDY8 824 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 ZNF462Q96JM2 2506 aa13.44□□□□□ -0.26
LSM5-207ENST00000410044 DIDO1Q9BTC0 2240 aaKnown RBP13.43□□□□□ -0.26
LSM5-207ENST00000410044 LOC100130705A0A1B0GUX0 176 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 SLC22A23A1A5C7 686 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 CLEC18AA5D8T8 446 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 J3QKU1 62 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 UPK3AO75631 287 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 GGT2P36268 569 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 CSNK1A1P48729 337 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 ADARB1P78563 741 aaKnown RBP13.43□□□□□ -0.26
LSM5-207ENST00000410044 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.43□□□□□ -0.26
LSM5-207ENST00000410044 KEAP1Q14145 624 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 SNCBQ16143 134 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 FBXL19-AS1Q494R0 122 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 PHYHD1Q5SRE7 291 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 SLC35F1Q5T1Q4 408 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 TTC23Q5W5X9 447 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 LRFN4Q6PJG9 635 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 CLEC18BQ6UXF7 455 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 Q6ZT83 130 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 GABRG1Q8N1C3 465 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 ZNF808Q8N4W9 903 aaPredicted RBP13.43□□□□□ -0.26
LSM5-207ENST00000410044 DHRSXQ8N5I4 330 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 CLEC18CQ8NCF0 446 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 OR4K13Q8NH42 304 aa13.43□□□□□ -0.26
LSM5-207ENST00000410044 TRUB1Q8WWH5 349 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms