RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SRA1Q9HD15 236 aaKnown RBP12.66□□□□□ -0.38
LIMS2-206ENST00000409754 B3GALT5Q9Y2C3 310 aa12.66□□□□□ -0.38
LIMS2-206ENST00000409754 FKBP7Q9Y680 259 aa12.66□□□□□ -0.38
LIMS2-206ENST00000409754 A6NIZ1 184 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 FAM171A2A8MVW0 826 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 DCTN6O00399 190 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 LRRTM2O43300 516 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 PLPP2O43688 288 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 DPP4P27487 766 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 RPS19P39019 145 aaKnown RBP12.65□□□□□ -0.38
LIMS2-206ENST00000409754 CENPAP49450 140 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 HCCSP53701 268 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 DSCR4P56555 118 aaPredicted RBP12.65□□□□□ -0.38
LIMS2-206ENST00000409754 RAP1BP61224 184 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 RAP1AP62834 184 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 MYBPHQ13203 477 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 ATP1A4Q13733 1029 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 TRAM1Q15629 374 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 FAM205BPQ63HN1 556 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 B3GNTL1Q67FW5 361 aaPredicted RBP12.65□□□□□ -0.38
LIMS2-206ENST00000409754 TIGD3Q6B0B8 471 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 EGFL6Q8IUX8 553 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 TIGD4Q8IY51 512 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 PM20D2Q8IYS1 436 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 RFLNBQ8N5W9 214 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 ZNF511Q8NB15 262 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 OR1J4Q8NGS1 313 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 ADAMTS17Q8TE56 1095 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 IP6K3Q96PC2 410 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 MNTQ99583 582 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 TMED9Q9BVK6 235 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 PALMDQ9NP74 551 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 SACM1LQ9NTJ5 587 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 COPS3Q9UNS2 423 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 HDGFL3Q9Y3E1 203 aa12.65□□□□□ -0.38
LIMS2-206ENST00000409754 SIRT4Q9Y6E7 314 aaPredicted RBP12.65□□□□□ -0.38
LIMS2-206ENST00000409754 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 A0A075B6Q4 140 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 A0A1W2PNV4 684 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 E9PI62 339 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 P04436 131 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 DAP3P51398 398 aaKnown RBP12.64□□□□□ -0.39
LIMS2-206ENST00000409754 RORCP51449 518 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 BLVRAP53004 296 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 GLYR1Q49A26 553 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-206ENST00000409754 ATP1A1-AS1Q5TC04 95 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 LYPD4Q6UWN0 246 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 MDGA2Q7Z553 956 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 PXKQ7Z7A4 578 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 MFSD4AQ8N468 514 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 IL22RA1Q8N6P7 574 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 OR5M1Q8NGP8 315 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 SNX33Q8WV41 574 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 PSMF1Q92530 271 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 RELTQ969Z4 430 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 THOC3Q96J01 351 aaKnown RBP12.64□□□□□ -0.39
LIMS2-206ENST00000409754 NUAK2Q9H093 628 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 MARCH7Q9H992 704 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 B9D1Q9UPM9 204 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 POLHQ9Y253 713 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 PEX16Q9Y5Y5 336 aa12.64□□□□□ -0.39
LIMS2-206ENST00000409754 GABRPO00591 440 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 CBR3O75828 277 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 RGS9O75916 674 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-206ENST00000409754 CDRT1O95170 752 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 BMP4P12644 408 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 HLA-DOBP13765 273 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 ZNF17P17021 662 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 TCEA1P23193 301 aaKnown RBP12.63□□□□□ -0.39
LIMS2-206ENST00000409754 GBX2P52951 348 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-206ENST00000409754 FOXK1P85037 733 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 ZNF239Q16600 458 aaKnown RBP12.63□□□□□ -0.39
LIMS2-206ENST00000409754 TP53I3Q53FA7 332 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 DMKNQ6E0U4 476 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-206ENST00000409754 CDC20BQ86Y33 519 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 ASB10Q8WXI3 467 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 SLC25A46Q96AG3 418 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 PELI1Q96FA3 418 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 C5orf34Q96MH7 638 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-206ENST00000409754 RERGLQ9H628 205 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 SNTG1Q9NSN8 517 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 GALNT8Q9NY28 637 aa12.63□□□□□ -0.39
LIMS2-206ENST00000409754 SLC22A23A1A5C7 686 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 NPIPA5E9PKD4 350 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 OGG1O15527 345 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 ZIC3O60481 467 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 AKR7A3O95154 331 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 CD1AP06126 327 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 S100A5P33763 92 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 CYB561P49447 251 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 HSF1Q00613 529 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 MELKQ14680 651 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 ST3GAL2Q16842 350 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 ZNF684Q5T5D7 378 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 ARL9Q6T311 187 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 TMEM91Q6ZNR0 172 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 BEST3Q8N1M1 668 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 KDM8Q8N371 416 aa12.62□□□□□ -0.39
LIMS2-206ENST00000409754 KLHL15Q96M94 604 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms