RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TMEM204Q9BSN7 226 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 TAPBPLQ9BX59 468 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 REG4Q9BYZ8 158 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 PRODH2Q9UF12 536 aa11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 LSM2Q9Y333 95 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-205ENST00000409542 OR2M5A3KFT3 312 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 SHISA8B8ZZ34 492 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 CCRL2O00421 344 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 SCO2O43819 266 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 IFI6P09912 130 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 HK1P19367 917 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 CD40LGP29965 261 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 GRK5P34947 590 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 SLC6A8P48029 635 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF91Q05481 1191 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 OXA1LQ15070 435 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF628Q5EBL2 1059 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 BEX5Q5H9J7 111 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF311Q5JNZ3 666 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 RAET1LQ5VY80 246 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 CDC73Q6P1J9 531 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 STAC2Q6ZMT1 411 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 ZER1Q7Z7L7 766 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF611Q8N823 705 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 GNPDA2Q8TDQ7 276 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 AKAP1Q92667 903 aaKnown RBP eCLIP11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 NEUROG1Q92886 237 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 OTUB1Q96FW1 271 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 TMEM80Q96HE8 168 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 VSTM2LQ96N03 204 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 MGLLQ99685 303 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 RHBDL2Q9NX52 303 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 SLC13A4Q9UKG4 626 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 CLEC4AQ9UMR7 237 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 LAMP3Q9UQV4 416 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 KCNE3Q9Y6H6 103 aa11.29□□□□□ -0.6
CHRNA1-205ENST00000409542 IRGMA1A4Y4 181 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 H3BML4 177 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 IGFBP1P08833 259 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 ADRA2AP08913 450 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 DBTP11182 482 aaKnown RBP11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 IFNA8P32881 189 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 TGFBR1P36897 503 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 PPP5CP53041 499 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 EFNB1P98172 346 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 CDK5Q00535 292 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 CHRNEQ04844 493 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 TRAM2Q15035 370 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 TSTQ16762 297 aaKnown RBP11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 TRIM16LQ309B1 348 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 MFSD12Q6NUT3 480 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 GDPGP1Q6ZNW5 385 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 FAM214BQ7L5A3 538 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 OLIG3Q7RTU3 272 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 C16orf62Q7Z3J2 963 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 WFDC8Q8IUA0 241 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 TOR1AIP2Q8NFQ8 470 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 OR5M11Q96RB7 305 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 IL4I1Q96RQ9 567 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 MND1Q9BWT6 205 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 OR51E2Q9H255 320 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 FOLH1BQ9HBA9 442 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 YAE1D1Q9NRH1 226 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 DNAJC27Q9NZQ0 273 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 PPP4R1LQ9P1A2 415 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 ZNF175Q9Y473 711 aa11.28□□□□□ -0.6
CHRNA1-205ENST00000409542 OVOL3O00110 214 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 FADS1O60427 444 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 CYP7B1O75881 506 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 SCG5P05408 212 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 SOD3P08294 240 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 ALOX5P09917 674 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 IL12BP29460 328 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 EVI2BP34910 448 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 ACVR1BP36896 505 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 CDKN1AP38936 164 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 GIPRP48546 466 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 BCAP31P51572 246 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 PNLIPRP2P54317 469 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 TSPAN31Q12999 210 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 EFR3AQ14156 821 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 GINS1Q14691 196 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 MED22Q15528 200 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 OR2L13Q8N349 312 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 TCEANCQ8N8B7 351 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 PROKR2Q8NFJ6 384 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 ADAMTS15Q8TE58 950 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 OPALINQ96PE5 141 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 NPAS1Q99742 590 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 TSSK6Q9BXA6 273 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 SIAEQ9HAT2 523 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 MRPS18AQ9NVS2 196 aaKnown RBP11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 TAS2R16Q9NYV7 291 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 TVP23BQ9NYZ1 205 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 DAPK2Q9UIK4 370 aa11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 DIMT1Q9UNQ2 313 aaKnown RBP11.27□□□□□ -0.6
CHRNA1-205ENST00000409542 A0A087WUU8 490 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 LOC100506127A0A0U1RQW1 187 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 FUOMA2VDF0 154 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms