RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MRM2Q9UI43 246 aaKnown RBP18.63■□□□□ 0.57
USP39-203ENST00000409470 SLC22A23A1A5C7 686 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 NPIPA5E9PKD4 350 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 GATBO75879 557 aaKnown RBP18.62■□□□□ 0.57
USP39-203ENST00000409470 IGHEP01854 428 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 IMPDH2P12268 514 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 RPS11P62280 158 aaKnown RBP eCLIP18.62■□□□□ 0.57
USP39-203ENST00000409470 ZP4Q12836 540 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 SFXN4Q6P4A7 337 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.62■□□□□ 0.57
USP39-203ENST00000409470 GDPD1Q8N9F7 314 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 OR14A2Q96R54 314 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 PISDQ9UG56 409 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 NPIPA1Q9UND3 350 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 WDFY3Q8IZQ1 3526 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 LIPT2A6NK58 231 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 EFNA2O43921 213 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 SLC19A2O60779 497 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 CD63P08962 238 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 IL7P13232 177 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 ALOX5APP20292 161 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 RAB3BP20337 219 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 RANBP1P43487 201 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 DAP3P51398 398 aaKnown RBP18.62■□□□□ 0.57
USP39-203ENST00000409470 NANOS3P60323 173 aaKnown RBP18.62■□□□□ 0.57
USP39-203ENST00000409470 LIPNQ5VXI9 398 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 C6orf15Q6UXA7 325 aaPredicted RBP18.62■□□□□ 0.57
USP39-203ENST00000409470 WDSUB1Q8N9V3 476 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 OR5M1Q8NGP8 315 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 KIAA1143Q96AT1 154 aaPredicted RBP18.62■□□□□ 0.57
USP39-203ENST00000409470 TSPAN10Q9H1Z9 355 aaPredicted RBP18.62■□□□□ 0.57
USP39-203ENST00000409470 ALKBH4Q9NXW9 302 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 MALT1Q9UDY8 824 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 ZNF281Q9Y2X9 895 aa18.62■□□□□ 0.57
USP39-203ENST00000409470 TRAV1-2A0A0B4J238 106 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 ANKRD33BA6NCL7 494 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 A6NIZ1 184 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 FAM25AB3EWG3 89 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 FAM25CB3EWG5 89 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 FAM25GB3EWG6 89 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 PHYHO14832 338 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 JMJD7P0C870 316 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 IFNGR1P15260 489 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 EVX1P49640 407 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 SSR4P51571 173 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 BLVRAP53004 296 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 RAP1BP61224 184 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 RPS18P62269 152 aaKnown RBP18.61■□□□□ 0.57
USP39-203ENST00000409470 RAP1AP62834 184 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 SNTA1Q13424 505 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 KCTD12Q96CX2 325 aaKnown RBP18.61■□□□□ 0.57
USP39-203ENST00000409470 ZPBPQ9BS86 351 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 TTYH2Q9BSA4 534 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 TMEM185BQ9H7F4 350 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 RASD1Q9Y272 281 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 COL27A1Q8IZC6 1860 aaPredicted RBP18.61■□□□□ 0.57
USP39-203ENST00000409470 IGLV1-36A0A0B4J1U3 117 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 ZNF593O00488 134 aaPredicted RBP18.61■□□□□ 0.57
USP39-203ENST00000409470 UPK3AO75631 287 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 CD59P13987 128 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 SPNP16150 400 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 CTLA4P16410 223 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 TCN2P20062 427 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 OTX2P32243 289 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 CLDN6P56747 220 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 POU3F1Q03052 451 aaPredicted RBP18.61■□□□□ 0.57
USP39-203ENST00000409470 EGR3Q06889 387 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 MRPL28Q13084 256 aaKnown RBP18.61■□□□□ 0.57
USP39-203ENST00000409470 MYBPHQ13203 477 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 AGAP7PQ5VUJ5 663 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 OTPQ5XKR4 325 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 C3orf33Q6P1S2 294 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 GDPD3Q7L5L3 318 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 EGFL6Q8IUX8 553 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 NAXDQ8IW45 347 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 TMEM156Q8N614 296 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 FADS6Q8N9I5 356 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 SETD6Q8TBK2 473 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 RPS4Y2Q8TD47 263 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 HAVCR2Q8TDQ0 301 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 HSD17B8Q92506 261 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 TAAR9Q96RI9 348 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 KCNG2Q9UJ96 466 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 ING1Q9UK53 422 aaPredicted RBP18.61■□□□□ 0.57
USP39-203ENST00000409470 TBC1D24Q9ULP9 559 aa18.61■□□□□ 0.57
USP39-203ENST00000409470 GPR179Q6PRD1 2367 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 A0A1W2PQ09 198 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 PMS2P1A4D2B8 440 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 OPN1LWP04000 364 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 UCHL1P09936 223 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 CRABP1P29762 137 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 IL18Q14116 193 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 SF3A2Q15428 464 aaKnown RBP18.6■□□□□ 0.57
USP39-203ENST00000409470 ETFDHQ16134 617 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 HSD17B12Q53GQ0 312 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 METAP1DQ6UB28 335 aaPredicted RBP18.6■□□□□ 0.57
USP39-203ENST00000409470 RPS19BP1Q86WX3 136 aaKnown RBP18.6■□□□□ 0.57
USP39-203ENST00000409470 OTOSQ8NHW6 89 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 ASB10Q8WXI3 467 aa18.6■□□□□ 0.57
USP39-203ENST00000409470 TCFL5Q9UL49 500 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms