RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 RUNX1T1Q06455 604 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 GABPB1Q06547 395 aaPredicted RBP17.82■□□□□ 0.44
PTCD3-202ENST00000409326 TOP3AQ13472 1001 aaPredicted RBP17.82■□□□□ 0.44
PTCD3-202ENST00000409326 CEACAM16Q2WEN9 425 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 FAM205BPQ63HN1 556 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 NOXO1Q8NFA2 376 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 OR1K1Q8NGR3 316 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 FANK1Q8TC84 345 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 ZNF837Q96EG3 531 aaPredicted RBP17.82■□□□□ 0.44
PTCD3-202ENST00000409326 TSPAN32Q96QS1 320 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 KATNB1Q9BVA0 655 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 MRPL13Q9BYD1 178 aaKnown RBP17.82■□□□□ 0.44
PTCD3-202ENST00000409326 GLTPQ9NZD2 209 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 DNAJB9Q9UBS3 223 aa17.82■□□□□ 0.44
PTCD3-202ENST00000409326 ZNF346Q9UL40 294 aaKnown RBP17.82■□□□□ 0.44
PTCD3-202ENST00000409326 ITPR2Q14571 2701 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 HRNRQ86YZ3 2850 aaPredicted RBP17.81■□□□□ 0.44
PTCD3-202ENST00000409326 CTAG2O75638 210 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 CDH2P19022 906 aaPredicted RBP17.81■□□□□ 0.44
PTCD3-202ENST00000409326 IST1P53990 364 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 CLRN1P58418 232 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 PPA1Q15181 289 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 HIST3H3Q16695 136 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 SMARCD3Q6STE5 483 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 THSD4Q6ZMP0 1018 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 WFDC8Q8IUA0 241 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 AQP11Q8NBQ7 271 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 ZNF519Q8TB69 540 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 MUCL1Q96DR8 90 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 SLC17A5Q9NRA2 495 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 ARMC1Q9NVT9 282 aa17.81■□□□□ 0.44
PTCD3-202ENST00000409326 APCP25054 2843 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 ARRDC5A6NEK1 342 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 DEFB108AA8MXU0 73 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 ZNF99A8MXY4 864 aaPredicted RBP17.8■□□□□ 0.44
PTCD3-202ENST00000409326 SIAH2O43255 324 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 DEAF1O75398 565 aaPredicted RBP17.8■□□□□ 0.44
PTCD3-202ENST00000409326 TIPRLO75663 272 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 GASTP01350 101 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 HRGP04196 525 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 HOXC12P31275 282 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 ACTR3P61158 418 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 ERVK-25P63136 954 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 C1QTNF12Q5T7M4 302 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 ANKRD16Q6P6B7 361 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 SEZ6L2Q6UXD5 910 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 ZNF620Q6ZNG0 422 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 FAM122BQ7Z309 247 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 TMEM179BQ7Z7N9 219 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 OR10G2Q8NGC3 310 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 GIPC3Q8TF64 312 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 HDAC2Q92769 488 aaKnown RBP17.8■□□□□ 0.44
PTCD3-202ENST00000409326 RAB3IPQ96QF0 476 aaPredicted RBP17.8■□□□□ 0.44
PTCD3-202ENST00000409326 KCNK17Q96T54 332 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 DGCR6LQ9BY27 220 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 OR52D1Q9H346 318 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 NELFAQ9H3P2 528 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 NRIP3Q9NQ35 241 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 RASSF1Q9NS23 344 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 MGAT4BQ9UQ53 548 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 AMDHD2Q9Y303 409 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 ADAM18Q9Y3Q7 739 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 SLC25A15Q9Y619 301 aa17.8■□□□□ 0.44
PTCD3-202ENST00000409326 A6NIZ1 184 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 E2F6O75461 281 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 ACVR1BP36896 505 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 RAP1BP61224 184 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 RAP1AP62834 184 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 ARF1P84077 181 aaKnown RBP17.79■□□□□ 0.44
PTCD3-202ENST00000409326 RFX4Q33E94 735 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 TBRG1Q3YBR2 411 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 HIKESHIQ53FT3 197 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 BEX5Q5H9J7 111 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 LRFN4Q6PJG9 635 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 DPY19L2P2Q6ZN68 376 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 TMEM200AQ86VY9 491 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 ARIH2OSQ8N7S6 290 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 WDR31Q8NA23 367 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 SYT14Q8NB59 555 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 OR52N5Q8NH56 324 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 MAGEE2Q8TD90 523 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-202ENST00000409326 BCL2L2Q92843 193 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-202ENST00000409326 ALG12Q9BV10 488 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 NGBQ9NPG2 151 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 OBP2BQ9NPH6 170 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 GRHPRQ9UBQ7 328 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 IL20RAQ9UHF4 553 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 AP4S1Q9Y587 144 aa17.79■□□□□ 0.44
PTCD3-202ENST00000409326 HEATR1Q9H583 2144 aaKnown RBP17.78■□□□□ 0.44
PTCD3-202ENST00000409326 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-202ENST00000409326 QDPRP09417 244 aa17.78■□□□□ 0.44
PTCD3-202ENST00000409326 NR2C1P13056 603 aa17.78■□□□□ 0.44
PTCD3-202ENST00000409326 SLC6A6P31641 620 aa17.78■□□□□ 0.44
PTCD3-202ENST00000409326 ZNF133P52736 654 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-202ENST00000409326 KPNB1Q14974 876 aaKnown RBP17.78■□□□□ 0.44
PTCD3-202ENST00000409326 GPR139Q6DWJ6 353 aa17.78■□□□□ 0.44
PTCD3-202ENST00000409326 ALKBH2Q6NS38 261 aa17.78■□□□□ 0.44
PTCD3-202ENST00000409326 RPL13AP3Q6NVV1 102 aa17.78■□□□□ 0.44
PTCD3-202ENST00000409326 KLHL24Q6TFL4 600 aa17.78■□□□□ 0.44
PTCD3-202ENST00000409326 ZNF627Q7L945 461 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms