RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 HSPA12AO43301 675 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ORC5O43913 435 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 GPRIN2O60269 458 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 MSL3P1P0C860 447 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 GALNSP34059 522 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 TOMM34Q15785 309 aaPredicted RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 AWAT2Q6E213 333 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 PAQR6Q6TCH4 344 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ZNF454Q8N9F8 522 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 BORCS8Q96FH0 119 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 RHNO1Q9BSD3 238 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 GPN1Q9HCN4 374 aaPredicted RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 SLC52A3Q9NQ40 469 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ASH2LQ9UBL3 628 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 SIGLEC7Q9Y286 467 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 HRH3Q9Y5N1 445 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 COL6A6A6NMZ7 2263 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 PRRG2O14669 202 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 GFRA3O60609 400 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ABHD16AO95870 558 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 CELA2AP08217 269 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 GCH1P30793 250 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 CD97P48960 835 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 MVDP53602 400 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 HCCSP53701 268 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 SPOCK1Q08629 439 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 FZD5Q13467 585 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 CSRP2Q16527 193 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 SLC35D3Q5M8T2 416 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ATAD3CQ5T2N8 411 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 JMJD6Q6NYC1 403 aaPredicted RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 CORO6Q6QEF8 472 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ZSCAN4Q8NAM6 433 aaPredicted RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 SMAP2Q8WU79 429 aaPredicted RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 TMEM106AQ96A25 262 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 TMEM43Q9BTV4 400 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 SLC22A4Q9H015 551 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 TXNIPQ9H3M7 391 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 SLC25A19Q9HC21 320 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ZNF226Q9NYT6 803 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 RASD1Q9Y272 281 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ZNF281Q9Y2X9 895 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 PLXNA4Q9HCM2 1894 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 FAM172BPA6NC97 362 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 GABRPO00591 440 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 MPIG6BO95866 241 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 CLUP10909 449 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 SLC2A5P22732 501 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 MAP2K6P52564 334 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 RPS25P62851 125 aaKnown RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 ZNF45Q02386 682 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 MFAP5Q13361 173 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 SLC36A2Q495M3 483 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 DCAF10Q5QP82 559 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 LIPNQ5VXI9 398 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 HEPHL1Q6MZM0 1159 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ZNF782Q6ZMW2 699 aaPredicted RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 TMPRSS11FQ6ZWK6 438 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 GLB1L2Q8IW92 636 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 OR2V1Q8NHB1 315 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 M1APQ8TC57 530 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 NEDD4LQ96PU5 975 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 LANCL2Q9NS86 450 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ZNF701Q9NV72 531 aaPredicted RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 ERVK13-1Q9NX77 482 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 IL20Q9NYY1 176 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 CEPT1Q9Y6K0 416 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 TRGV5A0A0B4J1U4 118 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 MAGEB4O15481 346 aaPredicted RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 SLC19A2O60779 497 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 FCGR2AP12318 317 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ZNF12P17014 697 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 HTR2AP28223 471 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 DIO1P49895 249 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 CAV3P56539 151 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ESPNLQ6ZVH7 1005 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 SLC16A9Q7RTY1 509 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ANKRD13BQ86YJ7 626 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 OR13C9Q8NGT0 318 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ZNF721Q8TF20 911 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 TAAR8Q969N4 342 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ITFG2Q969R8 447 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 OXGR1Q96P68 337 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 TRIB1Q96RU8 372 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 MNTQ99583 582 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 PDCD1LG2Q9BQ51 273 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 BCL7BQ9BQE9 202 aa8.24□□□□□ -1.09
LIG4-202ENST00000405925 ING1Q9UK53 422 aaPredicted RBP8.24□□□□□ -1.09
LIG4-202ENST00000405925 ANAPC1Q9H1A4 1944 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 FAM230AA0A1W2PPH8 454 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 PRSS37A4D1T9 235 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ZNF814B7Z6K7 855 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 SURF4O15260 269 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 LRRTM2O43300 516 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 NTN1O95631 604 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ZNF883P0CG24 379 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 CCL3P10147 92 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 MEOX1P50221 254 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 GZMMP51124 257 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 HMGA2P52926 109 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms