RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 OR2M2Q96R28 347 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 KCNK17Q96T54 332 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 DDOQ99489 341 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 PITX2Q99697 317 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 ALG12Q9BV10 488 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 PRRG3Q9BZD7 231 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 CMC2Q9NRP2 79 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 TVP23BQ9NYZ1 205 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 Q9UFV3 132 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 SURF4O15260 269 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 LRRTM2O43300 516 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 CNOT4O95628 575 aaKnown RBP10.9□□□□□ -0.66
LINC00339-201ENST00000404210 IFNGP01579 166 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 PGA4P0DJD7 388 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 PGA3P0DJD8 388 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 CD8BP10966 210 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 NR2C1P13056 603 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 CAPGP40121 348 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 HSPA13P48723 471 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 AQP4P55087 323 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 CDC42P60953 191 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 SIRPAP78324 504 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 RUNX1T1Q06455 604 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.9□□□□□ -0.66
LINC00339-201ENST00000404210 KRR1Q13601 381 aaKnown RBP10.9□□□□□ -0.66
LINC00339-201ENST00000404210 SNAPC1Q16533 368 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 HIST3H3Q16695 136 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 MESTQ5EB52 335 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 THEM4Q5T1C6 240 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 SLC35F1Q5T1Q4 408 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 VWA1Q6PCB0 445 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 BTLAQ7Z6A9 289 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 ADCK1Q86TW2 530 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 JAZF1Q86VZ6 243 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 WDFY1Q8IWB7 410 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 POMGNT2Q8NAT1 580 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 NPEPL1Q8NDH3 523 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 OR52E2Q8NGJ4 325 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 OR4K13Q8NH42 304 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 TFAP2CQ92754 450 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 APH1AQ96BI3 265 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 RASD2Q96D21 266 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 ADI1Q9BV57 179 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 PIGMQ9H3S5 423 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 GLTPQ9NZD2 209 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 VSX1Q9NZR4 365 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-201ENST00000404210 ERRFI1Q9UJM3 462 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-201ENST00000404210 FOXD3Q9UJU5 478 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-201ENST00000404210 PROCRQ9UNN8 238 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 GMPPBQ9Y5P6 360 aa10.9□□□□□ -0.66
LINC00339-201ENST00000404210 SPENQ96T58 3664 aaKnown RBP10.89□□□□□ -0.67
LINC00339-201ENST00000404210 INTS1Q8N201 2190 aaKnown RBP10.89□□□□□ -0.67
LINC00339-201ENST00000404210 PRSS37A4D1T9 235 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 RENP00797 406 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 CSNK1A1P48729 337 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-201ENST00000404210 CLRN1P58418 232 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 ADORA2A-AS1P86434 159 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 ITGADQ13349 1161 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 IL18R1Q13478 541 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 TSPO2Q5TGU0 170 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 CARD17Q5XLA6 110 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 FBXW9Q5XUX1 488 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 LEG1Q6P5S2 330 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 IZUMO2Q6UXV1 221 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 NCCRP1Q6ZVX7 275 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-201ENST00000404210 PTCHD4Q6ZW05 846 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 DEPDC4Q8N2C3 294 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 SLC37A3Q8NCC5 494 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 OR6N1Q8NGY5 312 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 CYGBQ8WWM9 190 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 ASB5Q8WWX0 329 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 CCDC120Q96HB5 630 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 PLEKHA8Q96JA3 519 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 NMNAT3Q96T66 252 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 SLCO5A1Q9H2Y9 848 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 FN3KQ9H479 309 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 C12orf49Q9H741 205 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 B3GAT2Q9NPZ5 323 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 COQ3Q9NZJ6 369 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 UPB1Q9UBR1 384 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 RNF6Q9Y252 685 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 SLC5A6Q9Y289 635 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 FREM1Q5H8C1 2179 aa10.89□□□□□ -0.67
LINC00339-201ENST00000404210 SLC22A23A1A5C7 686 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 OR6C68A6NDL8 312 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 RIIAD1A6NNX1 92 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 RPL36A-HNRNPH2H7BZ11 118 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 DVL2O14641 736 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 MSTNO14793 375 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 MPZL2O60487 215 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 UPK3AO75631 287 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 SLC2A10O95528 541 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 QDPRP09417 244 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 ZNF3P17036 446 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 EDNRAP25101 427 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 PCYT1AP49585 367 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 STK11Q15831 433 aa10.88□□□□□ -0.67
LINC00339-201ENST00000404210 PHYHD1Q5SRE7 291 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms