RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PYCARD-AS1I3L0S3 204 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 XRCC3O43542 346 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 RPP14O95059 124 aaKnown RBP18.01■□□□□ 0.47
CCDC47-202ENST00000403162 ABHD16AO95870 558 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 CD27P26842 260 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 MAOBP27338 520 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 RABIFP47224 123 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 NDUFAF6Q330K2 333 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 LIPNQ5VXI9 398 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 NHLRC1Q6VVB1 395 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 NPSR1Q6W5P4 371 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 C3orf49Q96BT1 292 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 WDR89Q96FK6 387 aaPredicted RBP18.01■□□□□ 0.47
CCDC47-202ENST00000403162 G6PC3Q9BUM1 346 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 FRRS1LQ9P0K9 344 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 MTFP1Q9UDX5 166 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 OPN4Q9UHM6 478 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 TP53BP1Q12888 1972 aaPredicted RBP18.01■□□□□ 0.47
CCDC47-202ENST00000403162 FANCMQ8IYD8 2048 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 A0A0C4DFX4 3053 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 CCDC163A0A0D9SF12 145 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 UBE2QL1A1L167 161 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 RP2O75695 350 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 CSTAP01040 98 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 VSIG10L2P0DP72 767 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 APEHP13798 732 aaKnown RBP18.01■□□□□ 0.47
CCDC47-202ENST00000403162 CSRP1P21291 193 aaKnown RBP18.01■□□□□ 0.47
CCDC47-202ENST00000403162 ITPKBP27987 946 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 LTBQ06643 244 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 JAZF1Q86VZ6 243 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 NAXDQ8IW45 347 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF595Q8IYB9 648 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF511Q8NB15 262 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 RCBTB1Q8NDN9 531 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 SCARB1Q8WTV0 552 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 CCDC74AQ96AQ1 378 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 Q96M85 177 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 LINC00052Q96N35 136 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 KLHDC2Q9Y2U9 406 aa18.01■□□□□ 0.47
CCDC47-202ENST00000403162 BDP1A6H8Y1 2624 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 A0A0J9YY10 115 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 TMEM72A0PK05 275 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 FAM171A2A8MVW0 826 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 TRIM77I1YAP6 450 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 RDH16O75452 317 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 RBBP9O75884 186 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF432O94892 652 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 IGF2P01344 180 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 TMIGD3P0DMS9 266 aaPredicted RBP18■□□□□ 0.47
CCDC47-202ENST00000403162 TDGF1P13385 188 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 OVCH2Q7RTZ1 564 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 FAM122BQ7Z309 247 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 TMPRSS12Q86WS5 348 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 OR52B4Q8NGK2 314 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF578Q96N58 590 aaPredicted RBP18■□□□□ 0.47
CCDC47-202ENST00000403162 CCNL2Q96S94 520 aaPredicted RBP18■□□□□ 0.47
CCDC47-202ENST00000403162 TAS2R8Q9NYW2 309 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 DTX4Q9Y2E6 619 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 SLC6A5Q9Y345 797 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 IGKV1D-42A0A075B6H8 117 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 TRBV5-7A0A0A0MS05 114 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 SERINC4A6NH21 518 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 RASGRP1O95267 797 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 PPP3CBP16298 524 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 NUP62P37198 522 aaPredicted RBP18■□□□□ 0.47
CCDC47-202ENST00000403162 SFRP5Q5T4F7 317 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 TMUB2Q71RG4 321 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 WDR5BQ86VZ2 330 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 CDC20BQ86Y33 519 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 MAML2Q8IZL2 1156 aaPredicted RBP18■□□□□ 0.47
CCDC47-202ENST00000403162 DTWD2Q8NBA8 298 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 CXorf58Q96LI9 332 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 ADAD1Q96M93 576 aaKnown RBP18■□□□□ 0.47
CCDC47-202ENST00000403162 OR1F2PQ96R84 312 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 FKRPQ9H9S5 495 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 Q9N2J8 555 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 HIF3AQ9Y2N7 669 aa18■□□□□ 0.47
CCDC47-202ENST00000403162 HEATR5AQ86XA9 2040 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 ANXA2P2A6NMY6 339 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 KRBOX1C9JBD0 128 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 ANXA2P07355 339 aaKnown RBP17.99■□□□□ 0.47
CCDC47-202ENST00000403162 CD14P08571 375 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 THEGLP0DJG4 465 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 POU3F2P20265 443 aaPredicted RBP17.99■□□□□ 0.47
CCDC47-202ENST00000403162 SOX2P48431 317 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 PCGF3Q3KNV8 242 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 TMEM81Q6P7N7 255 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF227Q86WZ6 799 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 OR4C16Q8NGL9 310 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF417Q8TAU3 575 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 LIPHQ8WWY8 451 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 RIT1Q92963 219 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 C1QTNF6Q9BXI9 259 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 STEAP1Q9UHE8 339 aa17.99■□□□□ 0.47
CCDC47-202ENST00000403162 A8MUA0 341 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 A8MXK9 166 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF254O75437 659 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 SERPINI2O75830 405 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 CSF1P09603 554 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 GABRA1P14867 456 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms