RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 PEX19P40855 299 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 OR12D2P58182 307 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 H3F3AP84243 136 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 MFAP5Q13361 173 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 FAM205BPQ63HN1 556 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 SSX6Q7RTT6 188 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 SLC16A9Q7RTY1 509 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 UEVLDQ8IX04 471 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 TIGD4Q8IY51 512 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 ZFP41Q8N8Y5 198 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 MDS2Q8NDY4 140 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 DYNC2LI1Q8TCX1 351 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 HAS2Q92819 552 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 OXGR1Q96P68 337 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 DCSTAMPQ9H295 470 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 ZNF552Q9H707 407 aaPredicted RBP11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 MED29Q9NX70 200 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 STUB1Q9UNE7 303 aa11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 SF3B6Q9Y3B4 125 aaKnown RBP11.9□□□□□ -0.5
CEACAM1-206ENST00000403136 PNMA8CA0A1B0GUJ8 204 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 TVP23AA6NH52 213 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 EIF1BO60739 113 aaKnown RBP11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 CELP19835 753 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 CRABP1P29762 137 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 CAPZA2P47755 286 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 CENPAP49450 140 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 CCL11P51671 97 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 BLVRAP53004 296 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 TUBA1BP68363 451 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 CSNK2A1P68400 391 aaPredicted RBP11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 GPR50Q13585 617 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 TBC1D25Q3MII6 688 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 CRTC2Q53ET0 693 aaPredicted RBP11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 WIPI1Q5MNZ9 446 aaPredicted RBP11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 USP43Q70EL4 1123 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 TUBA1AQ71U36 451 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 C4orf36Q96KX1 117 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 KLHL15Q96M94 604 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 SFXN2Q96NB2 322 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 KCNK17Q96T54 332 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 RNF32Q9H0A6 362 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 TSPAN10Q9H1Z9 355 aaPredicted RBP11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 RNF167Q9H6Y7 350 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 MARCH7Q9H992 704 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 EXOSC4Q9NPD3 245 aaKnown RBP11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 ZMIZ1Q9ULJ6 1067 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 SSR3Q9UNL2 185 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 COPS3Q9UNS2 423 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 POLHQ9Y253 713 aa11.9□□□□□ -0.51
CEACAM1-206ENST00000403136 IGLV1-36A0A0B4J1U3 117 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 DCDC2BA2VCK2 349 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 RAMP1O60894 148 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 CD46P15529 392 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 BIDP55957 195 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 HSF2Q03933 536 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 DGUOKQ16854 277 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 RSPO4Q2I0M5 234 aaPredicted RBP11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 CDONQ4KMG0 1287 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 VASH1Q7L8A9 365 aaPredicted RBP11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 GPAT4Q86UL3 456 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 WDFY1Q8IWB7 410 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 SYS1Q8N2H4 156 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 RFLNBQ8N5W9 214 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 SYT14Q8NB59 555 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 SNX33Q8WV41 574 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 TMEM203Q969S6 136 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 MRPL48Q96GC5 212 aaKnown RBP11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 ADAD1Q96M93 576 aaKnown RBP11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 NAA11Q9BSU3 229 aaPredicted RBP11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 EMC6Q9BV81 110 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 TRIM36Q9NQ86 728 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 B4GALT7Q9UBV7 327 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 RASD1Q9Y272 281 aa11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 KLF13Q9Y2Y9 288 aaPredicted RBP11.89□□□□□ -0.51
CEACAM1-206ENST00000403136 FREM2Q5SZK8 3169 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 ZNF891A8MT65 544 aaPredicted RBP11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 E9PI62 339 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 ZNF670-ZNF695F2Z2N8 137 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 KLRC4-KLRK1H3BQV0 150 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 LINC01387J3KSC0 135 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 TNFSF11O14788 317 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 LRRTM2O43300 516 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 NME2P1O60361 137 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 GFRA3O60609 400 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 VAMP5O95183 116 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 GPANK1O95872 356 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 HPNP05981 417 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 CTLA4P16410 223 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 ZNF43P17038 809 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 KLK2P20151 261 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 NME2P22392 152 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 GABRA5P31644 462 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 CD97P48960 835 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 AGFG1P52594 562 aaKnown RBP11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 CLDN20P56880 219 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 ACTA2P62736 377 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 RPS25P62851 125 aaKnown RBP11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 ACTG2P63267 376 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 ETFDHQ16134 617 aa11.88□□□□□ -0.51
CEACAM1-206ENST00000403136 GALNTL5Q7Z4T8 443 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms