RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 RPRMLQ8N4K4 120 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 RBMXL3Q8N7X1 1067 aaKnown RBP10.45□□□□□ -0.74
SKA3-203ENST00000400018 NPEPL1Q8NDH3 523 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 OR10D3Q8NH80 312 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 FNDC9Q8TBE3 224 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 TMEM163Q8TC26 289 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 HIF3AQ9Y2N7 669 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 WNT11O96014 354 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 PUDPQ08623 228 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 LY6DQ14210 128 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 TBR1Q16650 682 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 MAMDC2Q7Z304 686 aaPredicted RBP10.44□□□□□ -0.74
SKA3-203ENST00000400018 SETD9Q8NE22 299 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 FBLIM1Q8WUP2 373 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 RNFT2Q96EX2 444 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 ZNF486Q96H40 463 aaPredicted RBP10.44□□□□□ -0.74
SKA3-203ENST00000400018 WDR76Q9H967 626 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 NRIP3Q9NQ35 241 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 SERINC1Q9NRX5 453 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 CLN6Q9NWW5 311 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 GRHPRQ9UBQ7 328 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 TMEM5Q9Y2B1 443 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 MYO7BQ6PIF6 2116 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 CCRL2O00421 344 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 SDHBP21912 280 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 SRD5A2P31213 254 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 SLC6A6P31641 620 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 ATP6V1E1P36543 226 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 ETV1P50549 477 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 P2RY4P51582 365 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 GFRA1P56159 465 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 INSL4Q14641 139 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 PHYHD1Q5SRE7 291 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 GCNT2Q8N0V5 402 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 OR8J1Q8NGP2 316 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 HDAC2Q92769 488 aaKnown RBP10.44□□□□□ -0.74
SKA3-203ENST00000400018 NTNG2Q96CW9 530 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 RNF167Q9H6Y7 350 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 KRCC1Q9NPI7 259 aaPredicted RBP10.44□□□□□ -0.74
SKA3-203ENST00000400018 C8orf4Q9NR00 106 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 BOKQ9UMX3 212 aaPredicted RBP10.44□□□□□ -0.74
SKA3-203ENST00000400018 MED12LQ86YW9 2145 aa10.44□□□□□ -0.74
SKA3-203ENST00000400018 SLC35F4A4IF30 521 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 PRR23D1E9PI22 279 aaPredicted RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 TFECO14948 347 aaPredicted RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 PRR23D2P0DMB1 279 aaPredicted RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 CTLA4P16410 223 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 ACVR2AP27037 513 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 MSX1P28360 303 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 SELENOPP49908 381 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 KRR1Q13601 381 aaKnown RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 SGCBQ16585 318 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 AADACL4Q5VUY2 407 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 HBMQ6B0K9 141 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 CORO6Q6QEF8 472 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 LRRC69Q6ZNQ3 347 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 TMPPEQ6ZT21 453 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 STX19Q8N4C7 294 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 KISS1RQ969F8 398 aaPredicted RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 LGALS12Q96DT0 336 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 ISG20L2Q9H9L3 353 aaKnown RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 FKRPQ9H9S5 495 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 PSORS1C1Q9UIG5 152 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 RALYQ9UKM9 306 aaKnown RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 SPTAN1Q13813 2472 aaKnown RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 LRBAP50851 2863 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 PRR32B1ATL7 298 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 ZNF701M0R085 212 aaPredicted RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 SMAD9O15198 467 aaKnown RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 RRP8O43159 456 aaKnown RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 SLC16A7O60669 478 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 CD14P08571 375 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 FOXG1P55316 489 aaPredicted RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 CLDN17P56750 224 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 PON3Q15166 354 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 CDONQ4KMG0 1287 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 RPTNQ6XPR3 784 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 SLC35D2Q76EJ3 337 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 LINC00471Q8N535 108 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 CISD2Q8N5K1 135 aaKnown RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 DTX3Q8N9I9 347 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 NR4A3Q92570 626 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 KLHL15Q96M94 604 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 SLC38A2Q96QD8 506 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 SECISBP2Q96T21 854 aaKnown RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 PIGQQ9BRB3 760 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 ASPNQ9BXN1 380 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 SLC25A19Q9HC21 320 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 CMC2Q9NRP2 79 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 B3GNT3Q9Y2A9 372 aa10.43□□□□□ -0.74
SKA3-203ENST00000400018 DIDO1Q9BTC0 2240 aaKnown RBP10.43□□□□□ -0.74
SKA3-203ENST00000400018 A0A1B0GTH9 108 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 CLCA1A8K7I4 914 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 K7ENP7 123 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 DVL2O14641 736 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 SCG5P05408 212 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 PSMB9P28065 219 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 CARD18P57730 90 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 MED22Q15528 200 aa10.42□□□□□ -0.74
SKA3-203ENST00000400018 TMEM44Q2T9K0 475 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms