RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 PCDHGA9Q9Y5G4 932 aaKnown RBP10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 PLCH1Q4KWH8 1693 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 AHRP35869 848 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 SUB1P53999 127 aaKnown RBP eCLIP10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 TCTAP57738 103 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 HTRA4P83105 476 aaPredicted RBP10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 GK2Q14410 553 aaPredicted RBP10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 FHL5Q5TD97 284 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 TRNP1Q6NT89 227 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 NAXDQ8IW45 347 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 CNTN4Q8IWV2 1026 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 TEX26Q8N6G2 289 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 MZB1Q8WU39 189 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 DMRT3Q9NQL9 472 aa10.14□□□□□ -0.79
CACNA1C-216ENST00000399638 A0A096LPE4 126 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 A0A1W2PPZ6 126 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 SDHDO14521 159 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 ZNF264O43296 627 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 TK1P04183 234 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 LAP3P28838 519 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 RTP5Q14D33 572 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 ZNF750Q32MQ0 723 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 NXNL2Q5VZ03 156 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 LAIR1Q6GTX8 287 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 MFSD9Q8NBP5 474 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 DYNLRB2Q8TF09 96 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 SNAPC3Q92966 411 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 PRRC1Q96M27 445 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 SLC29A1Q99808 456 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 KIF25Q9UIL4 384 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 RNASEK-C17orf49H0YIS7 233 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 OR8U8P0C7N1 319 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 PITX1P78337 314 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 VRK2Q86Y07 508 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 CLECL1Q8IZS7 167 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 PINX1Q96BK5 328 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 DUS3LQ96G46 650 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 XYLT2Q9H1B5 865 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 TXNL4BQ9NX01 149 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 ZNF337Q9Y3M9 751 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 URGCP-MRPS24S4R325 110 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 TRAV18A0A075B6X5 111 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 CDC14BO60729 498 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 RETP07949 1114 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 RNLSQ5VYX0 342 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 DHRS11Q6UWP2 260 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 FBXL6Q8N531 539 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 PGAP3Q96FM1 320 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 POTEKPQ9BYX7 375 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 APMAPQ9HDC9 416 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 PCDHA9Q9Y5H5 950 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 HRO43593 1189 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 F13BP05160 661 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 CPMP14384 443 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 USF1P22415 310 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 EIF1P41567 113 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 RGS7BPQ6MZT1 257 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 DPPA2Q7Z7J5 298 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 SFTPA2Q8IWL1 248 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 SFTPA1Q8IWL2 248 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 OR8J3Q8NGG0 315 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 FYTTD1Q96QD9 318 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 NRSN2Q9GZP1 204 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 M0QZQ0 153 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 FRS3O43559 492 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 UBCP0CG48 685 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 SMIM18P0DKX4 95 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 JUNBP17275 347 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 GLRA1P23415 457 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 UNC50Q53HI1 259 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 LRRTM3Q86VH5 581 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 GJC3Q8NFK1 279 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 NOL4LQ96MY1 436 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 MFFQ9GZY8 342 aa10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 RIMS4Q9H426 269 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 ACSS1Q9NUB1 689 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 COL2A1P02458 1487 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-216ENST00000399638 TRAV27A0A087WT01 109 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 J3KRW8 73 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 PTGESO14684 152 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 ERP29P30040 261 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 SLC19A1P41440 591 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 PMP22Q01453 160 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 MARCH3Q86UD3 253 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 FAM109AQ8N4B1 249 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 OR52B6Q8NGF0 335 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 MAGIXQ9H6Y5 334 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 ZNF443Q9Y2A4 671 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 KRBA1A5PL33 1030 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 M0R3H8 397 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 TNFSF11O14788 317 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 GIFP27352 417 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 PSMB10P40306 273 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 FOXB2Q5VYV0 432 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 RHOUQ7L0Q8 258 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 BPIFB2Q8N4F0 458 aa10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 NDRG4Q9ULP0 352 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-216ENST00000399638 TMEM269A0A1B0GVZ9 245 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms