RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 CENPBD1B2RD01 187 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 B9A039 149 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 NPIPB4C9JG80 1138 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 BLOC1S5-TXNDC5H3BN57 136 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 CXCR6O00574 342 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 BCL10O95999 233 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 PGA4P0DJD7 388 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 PGA3P0DJD8 388 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 B4GALT1P15291 398 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 FUT1P19526 365 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 PRDX6P30041 224 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 SERPINF1P36955 418 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 GSK3BP49841 420 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 SNRPD2P62316 118 aaKnown RBP12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 RPL18Q07020 188 aaKnown RBP12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 KRTAP1-1Q07627 177 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 EFNB3Q15768 340 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 GSG1Q2KHT4 349 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 CLEC2AQ6UVW9 174 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 PIWIL3Q7Z3Z3 882 aaKnown RBP12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 HDDC2Q7Z4H3 204 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 OFCC1Q8IZS5 231 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 OR10H5Q8NGA6 315 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 PFN4Q8NHR9 129 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 CMTM5Q96DZ9 223 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 ZNF75AQ96N20 296 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 SEPHS2Q99611 448 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 ELAC2Q9BQ52 826 aaKnown RBP12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 RHNO1Q9BSD3 238 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 NSRP1Q9H0G5 558 aaKnown RBP12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 C20orf141Q9NUB4 165 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 ZNF224Q9NZL3 707 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 ABCD2Q9UBJ2 740 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 FBXL3Q9UKT7 428 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 JMJD1CQ15652 2540 aa12.9□□□□□ -0.34
SMIM11A-203ENST00000399299 ABCA1O95477 2261 aa12.9□□□□□ -0.35
SMIM11A-203ENST00000399299 ABCA2Q9BZC7 2435 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 A0A1W2PRG6 482 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 UBL3O95164 117 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 IGHG1P01857 330 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 HLA-HP01893 362 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 IFNW1P05000 195 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 CSF3P09919 207 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 ZNF14P17017 642 aaPredicted RBP12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 NUDT2P50583 147 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 DAP3P51398 398 aaKnown RBP12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 EFNA4P52798 201 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 SEC24CP53992 1094 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 HGFACQ04756 655 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 NPRL3Q12980 569 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 MELKQ14680 651 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 ADIPOQQ15848 244 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 HIST3H3Q16695 136 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 CBLL1Q75N03 491 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 VTCN1Q7Z7D3 282 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 GEMIN6Q8WXD5 167 aaKnown RBP12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 ASB10Q8WXI3 467 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 MRPL13Q9BYD1 178 aaKnown RBP12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 NOX3Q9HBY0 568 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 INIPQ9NRY2 104 aa12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 GMPR2Q9P2T1 348 aaKnown RBP12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 STX18Q9P2W9 335 aaKnown RBP12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 SONP18583 2426 aaKnown RBP12.89□□□□□ -0.35
SMIM11A-203ENST00000399299 VSTM5A8MXK1 200 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 GSTA4O15217 222 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 DHHO43323 396 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 SNX3O60493 162 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 OR4A8P0C604 315 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 OR8G3PP0DMU2 310 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 CD79AP11912 226 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 SLC25A16P16260 332 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 ZNF133P52736 654 aaPredicted RBP12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 NRN1LQ496H8 165 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 IFI44LQ53G44 452 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 LRFN4Q6PJG9 635 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 SLC22A24Q8N4F4 322 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 NOXO1Q8NFA2 376 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 PLK3Q9H4B4 646 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 TMEM38BQ9NVV0 291 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 HIF3AQ9Y2N7 669 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 FKBP7Q9Y680 259 aa12.88□□□□□ -0.35
SMIM11A-203ENST00000399299 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 A0A096LNT2 108 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 MCIDASD6RGH6 385 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 MGRN1O60291 552 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 RAB36O95755 333 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 ZNF682O95780 498 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 F12P00748 615 aaPredicted RBP12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 F13BP05160 661 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 NPR2P20594 1047 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 DRD4P21917 467 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 LSP1P33241 339 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 AQP2P41181 271 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 PPOXP50336 477 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 CLRN1P58418 232 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 PSME3P61289 254 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 RAB1AP62820 205 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 DAG1Q14118 895 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 TRAM2Q15035 370 aa12.87□□□□□ -0.35
SMIM11A-203ENST00000399299 TAF11Q15544 211 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms