RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ATP5C1P36542 298 aaKnown RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 RBMXP38159 391 aaKnown RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 NSG1P42857 185 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 SSR4P51571 173 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 CCNHP51946 323 aaPredicted RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 ACLYP53396 1101 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 SUB1P53999 127 aaKnown RBP eCLIP1.8□□□□□ -2.122e-7■□□□□ 11.2
CD47-203ENST00000398258 FGF8P55075 233 aaPredicted RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 CDH6P55285 790 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 SH3BGRP55822 239 aaPredicted RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 ZNF92Q03936 586 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 CKAP4Q07065 602 aaKnown RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 CUL2Q13617 745 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 FZD2Q14332 565 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 PPP1R7Q15435 360 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 SGCAQ16586 387 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 C2orf83Q53S99 150 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 LRRC10Q5BKY1 277 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 CARD17Q5XLA6 110 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 C6orf89Q6UWU4 347 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 H2AFVQ71UI9 128 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 NIPA1Q7RTP0 329 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 SCD5Q86SK9 330 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 PUSL1Q8N0Z8 303 aaKnown RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 MCOLN3Q8TDD5 553 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 TMEM54Q969K7 222 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 SMIM10Q96HG1 83 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 FAM210BQ96KR6 192 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 HSFY1Q96LI6 401 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 ZNF578Q96N58 590 aaPredicted RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 ASB8Q9H765 288 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 UGT1A7Q9HAW7 530 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 UGT1A10Q9HAW8 530 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 UGT1A8Q9HAW9 530 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 GNPTGQ9UJJ9 305 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 ZNF225Q9UK10 706 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 USP47Q96K76 1375 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.8□□□□□ -2.12
CD47-203ENST00000398258 WDR62O43379 1518 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 COL16A1Q07092 1604 aaPredicted RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 IGHV3-64DA0A0J9YX35 117 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 A0A1B0GUA9 196 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 A0A1B0GVI7 797 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 TRIM49D1C9J1S8 452 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 C9JVG2 144 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 DLGAP1O14490 977 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 RNF13O43567 381 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 CHST1O43916 411 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 CACNG3O60359 315 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 ERLIN2O94905 339 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 TSPAN13O95857 204 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 C6orf47O95873 294 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 TPM2P07951 284 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 TNNI1P19237 187 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 CHMLP26374 656 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 RDXP35241 583 aaKnown RBP1.79□□□□□ -2.12
CD47-203ENST00000398258 AQP2P41181 271 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 CSNK1DP48730 415 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 LHX2P50458 406 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 CCR8P51685 355 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 CRISP3P54108 245 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 TGFBIQ15582 683 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 HSP90AB3PQ58FF7 597 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 PAGE3Q5JUK9 113 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 PRAMEF20Q5VT98 475 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 SLC8B1Q6J4K2 584 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 LYPD2Q6UXB3 125 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 PP632Q6XCG6 107 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 Q6ZVH6 145 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 CAMK2N1Q7Z7J9 78 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 BIVMQ86UB2 503 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 FBXL13Q8NEE6 735 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 OR52K2Q8NGK3 314 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 OR1S2Q8NGQ3 325 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 OR2G2Q8NGZ5 317 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 TSEN15Q8WW01 171 aaKnown RBP1.79□□□□□ -2.12
CD47-203ENST00000398258 SLC38A4Q969I6 547 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 AURKBQ96GD4 344 aaPredicted RBP1.79□□□□□ -2.12
CD47-203ENST00000398258 LINC00167Q96N53 147 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 CHP1Q99653 195 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 ECSITQ9BQ95 431 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 OR51M1Q9H341 326 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 VPS37BQ9H9H4 285 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 NEK6Q9HC98 313 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 CTPS2Q9NRF8 586 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 GPATCH2LQ9NWQ4 482 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 RAB20Q9NX57 234 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 SLC25A37Q9NYZ2 338 aa1.79□□□□□ -2.12
CD47-203ENST00000398258 COL22A1Q8NFW1 1626 aaPredicted RBP1.78□□□□□ -2.12
CD47-203ENST00000398258 MSH6P52701 1360 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 CARMIL3Q8ND23 1372 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 A0A0B4J2A0 478 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 OR2AG2A6NM03 316 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 SGK1O00141 431 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 DYNC1I1O14576 645 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 TNFSF13O75888 250 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 CLPXO76031 633 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 IGLV2-23P01705 113 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 ALDOBP05062 364 aa1.78□□□□□ -2.12
CD47-203ENST00000398258 CSF3P09919 207 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms