RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 NR0B1P51843 470 aaKnown RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 RPL6Q02878 288 aaKnown RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ZNF273Q14593 569 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 UBXN2BQ14CS0 331 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 LIPNQ5VXI9 398 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ADGRG3Q86Y34 549 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SERPINA12Q8IW75 414 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ZNF431Q8TF32 576 aaPredicted RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 LIPHQ8WWY8 451 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MRPL48Q96GC5 212 aaKnown RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 EXOSC3Q9NQT5 275 aaKnown RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MRM2Q9UI43 246 aaKnown RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 PCDHGA9Q9Y5G4 932 aaKnown RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 IGKV3D-11A0A0A0MRZ8 115 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 CD1AP06126 327 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ARL4DP49703 201 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 HSF2Q03933 536 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FCN2Q15485 313 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 STPG1Q5TH74 334 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 C1orf189Q5VU69 101 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SLC16A9Q7RTY1 509 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 C9orf40Q8IXQ3 194 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SLC35F3Q8IY50 421 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ZNF687Q8N1G0 1237 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 OR1L3Q8NH93 324 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 RBPMSQ93062 196 aaKnown RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 CFAP54Q96N23 3096 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 DPAGT1Q9H3H5 408 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MRPL15Q9P015 296 aaKnown RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 EPHA6Q9UF33 1036 aa16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ING1Q9UK53 422 aaPredicted RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 NOSIPQ9Y314 301 aaKnown RBP16.64■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MT-ND4P03905 459 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 TCRBP04435 133 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SOX2P48431 317 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 HNRNPKP61978 463 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 BTG1P62324 171 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 PITPNAQ00169 270 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 CFHR1Q03591 330 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 NSDHLQ15738 373 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 C1QTNF6Q9BXI9 259 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SYT4Q9H2B2 425 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 WDR76Q9H967 626 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MMACHCQ9Y4U1 282 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 RPS10-NUDT3A0A1W2PQS6 291 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 IFITM5A6NNB3 132 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FAM25EA8MYX2 175 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 C11orf98E9PRG8 122 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 UPK3AO75631 287 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 RAF1P04049 648 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FCER2P06734 321 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 IL12BP29460 328 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SLC25A1P53007 311 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ODF4Q2M2E3 257 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 OR6N2Q8NGY6 317 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 PHF21AQ96BD5 680 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 CCNL2Q96S94 520 aaPredicted RBP16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 DPCDQ9BVM2 203 aaPredicted RBP16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 RDH8Q9NYR8 311 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FRRS1LQ9P0K9 344 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 IKZF2Q9UKS7 526 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MGAT4AQ9UM21 535 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 CAMK2AQ9UQM7 478 aa16.63■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ARID1BQ8NFD5 2236 aaPredicted RBP16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MBTPS2O43462 519 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 DHFRP00374 187 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 RRASP10301 218 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 EBPQ15125 230 aaKnown RBP16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 UBE2NLQ5JXB2 153 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FAM199XQ6PEV8 388 aaPredicted RBP16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ZNF600Q6ZNG1 722 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FCRLAQ7L513 359 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 DPY19L4Q7Z388 723 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 RPS4Y2Q8TD47 263 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FOXN4Q96NZ1 517 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 CACNG6Q9BXT2 260 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FOXQ1Q9C009 403 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 AKR7A3O95154 331 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 PLGP00747 810 aaPredicted RBP16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 HIST1H2ABP04908 130 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 APEHP13798 732 aaKnown RBP16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FOLR1P15328 257 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 HSD11B2P80365 405 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 BIKQ13323 160 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 TDGQ13569 410 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SHISA6Q6ZSJ9 500 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 HIST3H2AQ7L7L0 130 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 LINGO2Q7L985 606 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 KANSL1Q7Z3B3 1105 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FAM220AQ7Z4H9 259 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 HIST1H2ACQ93077 130 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SLC25A36Q96CQ1 311 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 OR1F2PQ96R84 312 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MFRPQ9BY79 579 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 MS4A7Q9GZW8 240 aaPredicted RBP16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ADAM19Q9H013 955 aa16.62■□□□□ 0.25
CHRFAM7A-202ENST00000397827 FER1L5A0AVI2 2057 aa16.61■□□□□ 0.25
CHRFAM7A-202ENST00000397827 SYPP08247 313 aa16.61■□□□□ 0.25
CHRFAM7A-202ENST00000397827 CXCR1P25024 350 aa16.61■□□□□ 0.25
CHRFAM7A-202ENST00000397827 ELAVL1Q15717 326 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms