RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 PRPF19Q9UMS4 504 aaKnown RBP11.66□□□□□ -0.54
HLA-DMA-202ENST00000395303 A0A1W2PRG6 482 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 M0R3G1 203 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 CLOCKO15516 846 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 SERPINI2O75830 405 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 IGKV3-15P01624 115 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 IGHMP01871 453 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 H1F0P07305 194 aaKnown RBP11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 ITGA2P17301 1181 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 AQP2P41181 271 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 CSNK1A1P48729 337 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 SLC9A3P48764 834 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 MTX3Q5HYI7 312 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 CARD17Q5XLA6 110 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 TBPL2Q6SJ96 375 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 TRPM8Q7Z2W7 1104 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 HDDC2Q7Z4H3 204 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 KRTAP1-3Q8IUG1 177 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 OR6N1Q8NGY5 312 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 MOSPD2Q8NHP6 518 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 SLC7A13Q8TCU3 470 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 ZNF566Q969W8 418 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 CCL19Q99731 98 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 MRPL13Q9BYD1 178 aaKnown RBP11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 ULBP2Q9BZM5 246 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 TAS2R1Q9NYW7 299 aa11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 STX18Q9P2W9 335 aaKnown RBP11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 FAM32AQ9Y421 112 aaKnown RBP11.65□□□□□ -0.54
HLA-DMA-202ENST00000395303 A0A096LPE4 126 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 A0A1W2PPZ6 126 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 M0R1B8 84 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 OVOL3O00110 214 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 IGHG1P01857 330 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 F13BP05160 661 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 ACADSP16219 412 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 DAP3P51398 398 aaKnown RBP11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 UBE2NP61088 152 aaKnown RBP11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 FOXD4Q12950 439 aaPredicted RBP11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 MELKQ14680 651 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 LAPTM4AQ15012 233 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 PGGHGQ32M88 737 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 ARMC4Q5T2S8 1044 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 LCN8Q6JVE9 175 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 PODNL1Q6PEZ8 512 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 LRFN4Q6PJG9 635 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 ZNF730Q6ZMV8 503 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 DTX2Q86UW9 622 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 ZNF75AQ96N20 296 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 SLC38A2Q96QD8 506 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 FOXB1Q99853 325 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 C1QTNF6Q9BXI9 259 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 GSX2Q9BZM3 304 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 TXNIPQ9H3M7 391 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 IL1RAPQ9NPH3 570 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 ZNF701Q9NV72 531 aaPredicted RBP11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 B3GNT2Q9NY97 397 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 TMEM5Q9Y2B1 443 aa11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 YLPM1P49750 1951 aaKnown RBP11.64□□□□□ -0.55
HLA-DMA-202ENST00000395303 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 TCRBV5S2A0A599 114 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 ZNF503-AS2A6NEH8 195 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 EFCAB9A8MZ26 197 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 E7EQL1 145 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 hCG_2039718K7EN88 272 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 DHHO43323 396 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 SMPD2O60906 423 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 TRMUO75648 421 aaKnown RBP11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 SOD3P08294 240 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 CBR1P16152 277 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 ATP6V1B2P21281 511 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 OMPP47874 163 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 LIMS1P48059 325 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 CDH11P55287 796 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 ADAM8P78325 824 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 RUNX1T1Q06455 604 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 SPOCK1Q08629 439 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 TRIM25Q14258 630 aaKnown RBP11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 ALG10Q5BKT4 473 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 SHEQ5VZ18 495 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 PRSS57Q6UWY2 283 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 B3GLCTQ6Y288 498 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 PIWIL3Q7Z3Z3 882 aaKnown RBP11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 CDK20Q8IZL9 346 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 NOXO1Q8NFA2 376 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 SMAP2Q8WU79 429 aaPredicted RBP11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 TMEM171Q8WVE6 324 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 NMD3Q96D46 503 aaKnown RBP11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 KATNB1Q9BVA0 655 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 GSX1Q9H4S2 264 aaPredicted RBP11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 CISD1Q9NZ45 108 aaKnown RBP11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 ZNF224Q9NZL3 707 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 POFUT2Q9Y2G5 429 aa11.63□□□□□ -0.55
HLA-DMA-202ENST00000395303 TRAV27A0A087WT01 109 aa11.62□□□□□ -0.55
HLA-DMA-202ENST00000395303 TRBV4-1A0A0J9YWV2 114 aa11.62□□□□□ -0.55
HLA-DMA-202ENST00000395303 SH3PXD2BA1X283 911 aa11.62□□□□□ -0.55
HLA-DMA-202ENST00000395303 CDC42EP2O14613 210 aa11.62□□□□□ -0.55
HLA-DMA-202ENST00000395303 MGRN1O60291 552 aa11.62□□□□□ -0.55
HLA-DMA-202ENST00000395303 PTP4A3O75365 173 aa11.62□□□□□ -0.55
HLA-DMA-202ENST00000395303 UBOX5O94941 541 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms