RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 ERP29P30040 261 aaKnown RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 PTGS2P35354 604 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 EFNB2P52799 333 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 NDUFA5Q16718 116 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 FCRLAQ7L513 359 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 PRSS42Q7Z5A4 293 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 DND1Q8IYX4 353 aaKnown RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 WDR89Q96FK6 387 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 SLC23A1Q9UHI7 598 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 FLVCR2Q9UPI3 526 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 B3GALT1Q9Y5Z6 326 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 STARD6P59095 220 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 SKP1P63208 163 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 MFGE8Q08431 387 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 DYRK1AQ13627 763 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 WDR38Q5JTN6 314 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 DPY19L4Q7Z388 723 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 NUDT22Q9BRQ3 303 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 ULBP3Q9BZM4 244 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 KCNK15Q9H427 330 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 KIF26BQ2KJY2 2108 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 IGKV1D-43A0A0B4J1Z2 117 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 CPNE3O75131 537 aaKnown RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 ANOS1P23352 680 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 GRK6P43250 576 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 NR0B1P51843 470 aaKnown RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 SNRPD2P62316 118 aaKnown RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 MDGA2Q7Z553 956 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 SERPINA12Q8IW75 414 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 GLB1L2Q8IW92 636 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 OTOSQ8NHW6 89 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 SLC25A28Q96A46 364 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 ZDHHC12Q96GR4 267 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 FOXN4Q96NZ1 517 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 WDR77Q9BQA1 342 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 UTP23Q9BRU9 249 aaKnown RBP13.87□□□□□ -0.19
CPSF7-202ENST00000394888 PCED1AQ9H1Q7 454 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 HRASLSQ9HDD0 168 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 NUBP2Q9Y5Y2 271 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 CACNA1EQ15878 2313 aa13.87□□□□□ -0.19
CPSF7-202ENST00000394888 IGLV3-12A0A075B6K2 115 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 EFNA2O43921 213 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 SERPINI2O75830 405 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 CCR9P51686 369 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 LGALS3BPQ08380 585 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 Q499Y3 187 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 SLC6A19Q695T7 634 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 Q6ZTK2 550 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 C4orf45Q96LM5 186 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 CTLA4P16410 223 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 LCN1P31025 176 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 MECP2P51608 486 aaKnown RBP13.86□□□□□ -0.19
CPSF7-202ENST00000394888 SMAD2Q15796 467 aaKnown RBP13.86□□□□□ -0.19
CPSF7-202ENST00000394888 BTN2A1Q7KYR7 527 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 CARFQ8N187 725 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 ZFP3Q96NJ6 502 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 ANKRD20A5PA0PJZ0 165 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 MS4A18H0YCH9 400 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 RPP14O95059 124 aaKnown RBP13.86□□□□□ -0.19
CPSF7-202ENST00000394888 P2RX1P51575 399 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 CCR4P51679 360 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 EGR3Q06889 387 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 IKZF1Q13422 519 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 MS4A18Q3C1V0 323 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 C1orf189Q5VU69 101 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 ZNF385CQ66K41 422 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-202ENST00000394888 KRT74Q7RTS7 529 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 NPDC1Q9NQX5 325 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-202ENST00000394888 B9D1Q9UPM9 204 aa13.86□□□□□ -0.19
CPSF7-202ENST00000394888 IGHV3-20A0A0C4DH32 117 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 PLPP3O14495 311 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 CDC40O60508 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
CPSF7-202ENST00000394888 DKK1O94907 266 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 CDK2P24941 298 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 PTGDSP41222 190 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 RAG2P55895 527 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 RPL6Q02878 288 aaKnown RBP13.85□□□□□ -0.19
CPSF7-202ENST00000394888 CAMK2DQ13557 499 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 SGCBQ16585 318 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 ADAMTS14Q8WXS8 1223 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 HGDQ93099 445 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 HAVCR1Q96D42 359 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 NKX3-1Q99801 234 aaPredicted RBP13.85□□□□□ -0.19
CPSF7-202ENST00000394888 OR11A1Q9GZK7 315 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 ZNF768Q9H5H4 540 aaKnown RBP13.85□□□□□ -0.19
CPSF7-202ENST00000394888 MRPL15Q9P015 296 aaKnown RBP13.85□□□□□ -0.19
CPSF7-202ENST00000394888 V9GY05 133 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 NCKAP5O14513 1909 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 TRAV36DV7A0A075B6V5 113 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 WIPF3A6NGB9 483 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 FOSL2P15408 326 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 TALDO1P37837 337 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 SELENOPP49908 381 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 HNRNPKP61978 463 aaKnown RBP eCLIP13.85□□□□□ -0.191e-8■■□□□ 12.8
CPSF7-202ENST00000394888 C19orf57Q0VDD7 668 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 ACKR1Q16570 336 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 OLFML2AQ68BL7 652 aa13.85□□□□□ -0.19
CPSF7-202ENST00000394888 FAAP20Q6NZ36 180 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms