RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 KLRF1Q9NZS2 232 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 GNG8Q9UK08 70 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SLC6A14Q9UN76 642 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ICE1Q9Y2F5 2266 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 A0A087WZY1 265 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 MFSD2BA6NFX1 497 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ACOT7O00154 380 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 PHOX2AO14813 284 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SEC14L5O43304 696 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ACP2P11117 423 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 AKR1C3P42330 323 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SLC1A3P43003 542 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 RAD52P43351 418 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 CCR9P51686 369 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 FXYD6P3P58550 94 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 CAMK2DQ13557 499 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ZNF750Q32MQ0 723 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 DCST2Q5T1A1 773 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 ARTNQ5T4W7 220 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 TMEM71Q6P5X7 295 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 TMEM64Q6YI46 380 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 PPP1R3BQ86XI6 285 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 MMP21Q8N119 569 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 NAXEQ8NCW5 288 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 NT5CQ8TCD5 201 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 TSEN15Q8WW01 171 aaKnown RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 APH1BQ8WW43 257 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 RNF31Q96EP0 1072 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SEC22AQ96IW7 307 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 BCL2L14Q9BZR8 327 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 SYNPO2LQ9H987 977 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 A4GALTQ9NPC4 353 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 TAS2R8Q9NYW2 309 aa5.23□□□□□ -1.57
RFFL-202ENST00000394597 USP36Q9P275 1121 aaKnown RBP5.23□□□□□ -1.57
RFFL-202ENST00000394597 UTRNP46939 3433 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 A0A087X0M5 115 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 A0A1B0GX30 115 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 GXYLT2A0PJZ3 443 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 LILRA5A6NI73 299 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 H3BSH0 61 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 SPINT1O43278 529 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 HCRTR2O43614 444 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 OR2T1O43869 369 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 GLB1P16278 677 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 CPEP16870 476 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 ACVR2AP27037 513 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 CAPZBP47756 277 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 GPR143P51810 404 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 RAE1P78406 368 aaKnown RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 GAB1Q13480 694 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 ACSM3Q53FZ2 586 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 AADACL4Q5VUY2 407 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 LAIR2Q6ISS4 152 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 FBXO42Q6P3S6 717 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 NAXDQ8IW45 347 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 GATSQ8NAP1 163 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 POMGNT2Q8NAT1 580 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 OR11H4Q8NGC9 324 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 JSRP1Q96MG2 331 aaPredicted RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 C20orf24Q9BUV8 137 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 ALG8Q9BVK2 526 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 METTL7AQ9H8H3 244 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 IL20RAQ9UHF4 553 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 MEMO1Q9Y316 297 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 CCL27Q9Y4X3 112 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 PQLC2LA1A4F0 135 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 A8MVJ9 347 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 MCRIP1C9JLW8 97 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 GALR3O60755 368 aaPredicted RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 PIAS2O75928 621 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 SLC34A2O95436 690 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 MPC2O95563 127 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 CYB5AP00167 134 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 MAOAP21397 527 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 TUBG1P23258 451 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 SOX2P48431 317 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 MTNR1BP49286 362 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 RNF144AP50876 292 aaPredicted RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 UBE2MP61081 183 aaKnown RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 ETFRF1Q6IPR1 90 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 NUP54Q7Z3B4 507 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 CAMKMTQ7Z624 323 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 GID4Q8IVV7 300 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 STPG2Q8N412 459 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 AGBL5Q8NDL9 886 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 DNAAF1Q8NEP3 725 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 OR6K6Q8NGW6 343 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 OR5W2Q8NH69 310 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 RRNAD1Q96FB5 475 aaKnown RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 SLC41A3Q96GZ6 507 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 NECAB3Q96P71 396 aaPredicted RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 EDEM2Q9BV94 578 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 ATG5Q9H1Y0 275 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 UNKLQ9H9P5 680 aaKnown RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 ISYNA1Q9NPH2 558 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 PRDM7Q9NQW5 492 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 ABRACLQ9P1F3 81 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 PLEKHB1Q9UF11 243 aaPredicted RBP5.22□□□□□ -1.57
RFFL-202ENST00000394597 PLXNA3P51805 1871 aa5.22□□□□□ -1.57
RFFL-202ENST00000394597 NYNRINQ9P2P1 1898 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms