RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 NPAP1Q9NZP6 1156 aa16.4■□□□□ 0.22
SNCB-202ENST00000393693 SLC7A7Q9UM01 511 aa16.4■□□□□ 0.22
SNCB-202ENST00000393693 B3GALT5Q9Y2C3 310 aa16.4■□□□□ 0.22
SNCB-202ENST00000393693 ABCA1O95477 2261 aa16.4■□□□□ 0.22
SNCB-202ENST00000393693 LOC100130705A0A1B0GUX0 176 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 SMAD9O15198 467 aaKnown RBP16.39■□□□□ 0.21
SNCB-202ENST00000393693 SLC16A6O15403 523 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 SSX4O60224 188 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 GASTP01350 101 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 IGHV1-2P23083 117 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 HTR2AP28223 471 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 SUMO3P55854 103 aaPredicted RBP16.39■□□□□ 0.21
SNCB-202ENST00000393693 RAC3P60763 192 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 RASGEF1BQ0VAM2 473 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 QPRTQ15274 297 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 ZNF770Q6IQ21 691 aaPredicted RBP16.39■□□□□ 0.21
SNCB-202ENST00000393693 ULK3Q6PHR2 472 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 SLC43A2Q8N370 569 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 PARP8Q8N3A8 854 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 TMCO5AQ8N6Q1 288 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 SETD9Q8NE22 299 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 RNF217Q8TC41 542 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 DNAJA4Q8WW22 397 aaPredicted RBP16.39■□□□□ 0.21
SNCB-202ENST00000393693 NANOS1Q8WY41 292 aaKnown RBP16.39■□□□□ 0.21
SNCB-202ENST00000393693 MRGPRX4Q96LA9 322 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 MBOAT4Q96T53 435 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 GABARAPL3Q9BY60 117 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 KLHL9Q9P2J3 617 aa16.39■□□□□ 0.21
SNCB-202ENST00000393693 IGHV4-30-2A0A087WSY4 118 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 A0A087WUU8 490 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 MAGEA13PA6NCF6 341 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 CHP2O43745 196 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 MITFO75030 526 aaPredicted RBP16.38■□□□□ 0.21
SNCB-202ENST00000393693 CHN2P52757 468 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 CDH11P55287 796 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 ESRRGP62508 458 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 NPRL3Q12980 569 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 SELENBP1Q13228 472 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 SKP2Q13309 424 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 SEC23BQ15437 767 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 SWT1Q5T5J6 900 aaKnown RBP16.38■□□□□ 0.21
SNCB-202ENST00000393693 WBP2NLQ6ICG8 309 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 C1orf94Q6P1W5 598 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 PGBD2Q6P3X8 592 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 MBOAT2Q6ZWT7 520 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 DTX2Q86UW9 622 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 TSPYL5Q86VY4 417 aaPredicted RBP16.38■□□□□ 0.21
SNCB-202ENST00000393693 CDK20Q8IZL9 346 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 C8orf59Q8N0T1 100 aaPredicted RBP16.38■□□□□ 0.21
SNCB-202ENST00000393693 CADM2Q8N3J6 435 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 APOL4Q9BPW4 351 aa16.38■□□□□ 0.21
SNCB-202ENST00000393693 USB1Q9BQ65 265 aaKnown RBP16.38■□□□□ 0.21
SNCB-202ENST00000393693 CADP27708 2225 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 A0A0B4J2E0 115 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 A0A1B0GWA3 101 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 A0A1B0GX12 115 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 ABCD4O14678 606 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 CYTIPO60759 359 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 BCAS1O75363 584 aaPredicted RBP16.37■□□□□ 0.21
SNCB-202ENST00000393693 IFNA2P01563 188 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 PGCP20142 388 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 RYKP34925 604 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 RBM34P42696 430 aaKnown RBP16.37■□□□□ 0.21
SNCB-202ENST00000393693 CCR4P51679 360 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 PLAURQ03405 335 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 SLC25A53Q5H9E4 307 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 ALG10BQ5I7T1 473 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 CD300LDQ6UXZ3 194 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 USP51Q70EK9 711 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 NKAIN4Q8IVV8 208 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 OR5W2Q8NH69 310 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 HTRA1Q92743 480 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 OR5B2Q96R09 309 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 NIPSNAP1Q9BPW8 284 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 GRIP2Q9C0E4 1043 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 BARX1Q9HBU1 254 aaPredicted RBP16.37■□□□□ 0.21
SNCB-202ENST00000393693 TMEM5Q9Y2B1 443 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 GMPPBQ9Y5P6 360 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 HSPE1-MOB4S4R3N1 261 aa16.37■□□□□ 0.21
SNCB-202ENST00000393693 A0A096LNT2 108 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 A8MV72 311 aaPredicted RBP16.36■□□□□ 0.21
SNCB-202ENST00000393693 OSMP13725 252 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 CBFBQ13951 182 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 CHRFAM7AQ494W8 412 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 TTC33Q6PID6 262 aaPredicted RBP16.36■□□□□ 0.21
SNCB-202ENST00000393693 THAP5Q7Z6K1 395 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 LSRQ86X29 649 aaPredicted RBP16.36■□□□□ 0.21
SNCB-202ENST00000393693 ZNF563Q8TA94 476 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 TMEM239Q8WW34 195 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 MUCL1Q96DR8 90 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 RHNO1Q9BSD3 238 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 MED31Q9Y3C7 131 aa16.36■□□□□ 0.21
SNCB-202ENST00000393693 HTR3EA5X5Y0 456 aa16.35■□□□□ 0.21
SNCB-202ENST00000393693 E7EQL1 145 aa16.35■□□□□ 0.21
SNCB-202ENST00000393693 ETV2O00321 342 aaPredicted RBP16.35■□□□□ 0.21
SNCB-202ENST00000393693 TNFAIP8O95379 198 aa16.35■□□□□ 0.21
SNCB-202ENST00000393693 IGHV3-9P01782 118 aa16.35■□□□□ 0.21
SNCB-202ENST00000393693 THY1P04216 161 aa16.35■□□□□ 0.21
SNCB-202ENST00000393693 PNMTP11086 282 aa16.35■□□□□ 0.21
SNCB-202ENST00000393693 COX5AP20674 150 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms