RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 CLDN6P56747 220 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 GLYR1Q49A26 553 aaPredicted RBP22.66■■□□□ 1.22
SHOX2-201ENST00000389589 OR6N2Q8NGY6 317 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 RPS4Y2Q8TD47 263 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 RELTQ969Z4 430 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 NTNG2Q96CW9 530 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 NPIPA1Q9UND3 350 aa22.66■■□□□ 1.22
SHOX2-201ENST00000389589 ALPK2Q86TB3 2170 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 DVL2O14641 736 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 MAGEB3O15480 346 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 CAV3P56539 151 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 PPP3R1P63098 170 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 MYBPHQ13203 477 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 SELENBP1Q13228 472 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 MZT2AQ6P582 158 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 ADPRHL1Q8NDY3 354 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 ASB10Q8WXI3 467 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 C5orf34Q96MH7 638 aa22.65■■□□□ 1.22
SHOX2-201ENST00000389589 SLC16A7O60669 478 aa22.64■■□□□ 1.22
SHOX2-201ENST00000389589 GATBO75879 557 aaKnown RBP22.64■■□□□ 1.22
SHOX2-201ENST00000389589 AKR7A3O95154 331 aa22.64■■□□□ 1.22
SHOX2-201ENST00000389589 EGR3Q06889 387 aa22.64■■□□□ 1.22
SHOX2-201ENST00000389589 MELKQ14680 651 aa22.64■■□□□ 1.22
SHOX2-201ENST00000389589 ACOT12Q8WYK0 555 aa22.64■■□□□ 1.22
SHOX2-201ENST00000389589 SGCZQ96LD1 299 aa22.64■■□□□ 1.22
SHOX2-201ENST00000389589 ATF6BQ99941 703 aa22.64■■□□□ 1.22
SHOX2-201ENST00000389589 MIXL1Q9H2W2 232 aa22.64■■□□□ 1.22
SHOX2-201ENST00000389589 IGLV1-36A0A0B4J1U3 117 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 A0A1W2PNV4 684 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 KRT8P05787 483 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 CCL3P10147 92 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 HLA-DOBP13765 273 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 ALOX5APP20292 161 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 SHC1P29353 583 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 NLGN4YQ8NFZ3 816 aaPredicted RBP22.64■■□□□ 1.21
SHOX2-201ENST00000389589 RNF32Q9H0A6 362 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 KLHDC2Q9Y2U9 406 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 V9GYH0 126 aa22.64■■□□□ 1.21
SHOX2-201ENST00000389589 TTC28Q96AY4 2481 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 ANKRD33BA6NCL7 494 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 HSPB2A8KAH6 182 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 CENPBD1B2RD01 187 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 SNPHO15079 494 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 PSMB10P40306 273 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 HSF1Q00613 529 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 SPEM2Q0P670 501 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 HSPB2Q16082 182 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 STEAP3Q658P3 488 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 SLC35D2Q76EJ3 337 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 KDM8Q8N371 416 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 SUMF1Q8NBK3 374 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 PHYHIPQ92561 330 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 GPR87Q9BY21 358 aa22.63■■□□□ 1.21
SHOX2-201ENST00000389589 CCDC86Q9H6F5 360 aaKnown RBP22.63■■□□□ 1.21
SHOX2-201ENST00000389589 PRR32B1ATL7 298 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 PFDN1O60925 122 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 NCR1O76036 304 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 HLA-DQA2P01906 255 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 TGM1P22735 817 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 ZMAT1Q5H9K5 638 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 H3F3CQ6NXT2 135 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 DNM1P34Q6PK57 102 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 TRILQ7L0X0 811 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 DPY19L4Q7Z388 723 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 YIPF7Q8N8F6 280 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 OTOSQ8NHW6 89 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 ABTB1Q969K4 478 aaPredicted RBP22.62■■□□□ 1.21
SHOX2-201ENST00000389589 PPIL3Q9H2H8 161 aaKnown RBP22.62■■□□□ 1.21
SHOX2-201ENST00000389589 FOXJ2Q9P0K8 574 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 MRM2Q9UI43 246 aaKnown RBP22.62■■□□□ 1.21
SHOX2-201ENST00000389589 HDGFL3Q9Y3E1 203 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 A0A1W2PNU3 283 aaPredicted RBP22.62■■□□□ 1.21
SHOX2-201ENST00000389589 ARL6IP5O75915 188 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 IFNGR1P15260 489 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 DNASE1L3Q13609 305 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 HBMQ6B0K9 141 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 GTPBP8Q8N3Z3 284 aaPredicted RBP22.62■■□□□ 1.21
SHOX2-201ENST00000389589 FAM83FQ8NEG4 500 aaPredicted RBP22.62■■□□□ 1.21
SHOX2-201ENST00000389589 DIRAS2Q96HU8 199 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 FAM117AQ9C073 453 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 PROK2Q9HC23 129 aa22.62■■□□□ 1.21
SHOX2-201ENST00000389589 RPH3AQ9Y2J0 694 aaPredicted RBP22.62■■□□□ 1.21
SHOX2-201ENST00000389589 TRAV1-2A0A0B4J238 106 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 C21orf140B9A014 251 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 SERPINA7P05543 415 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 OR8G3PP0DMU2 310 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 LIFP15018 202 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 CTLA4P16410 223 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 DSCR4P56555 118 aaPredicted RBP22.61■■□□□ 1.21
SHOX2-201ENST00000389589 POU3F1Q03052 451 aaPredicted RBP22.61■■□□□ 1.21
SHOX2-201ENST00000389589 OR1J4Q8NGS1 313 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 ASB17Q8WXJ9 295 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 KCTD12Q96CX2 325 aaKnown RBP22.61■■□□□ 1.21
SHOX2-201ENST00000389589 SDHCQ99643 169 aaPredicted RBP22.61■■□□□ 1.21
SHOX2-201ENST00000389589 P4HTMQ9NXG6 502 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 COMMD3Q9UBI1 195 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 SEC14L5O43304 696 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 ABHD16AO95870 558 aa22.61■■□□□ 1.21
SHOX2-201ENST00000389589 TCEA1P23193 301 aaKnown RBP22.61■■□□□ 1.21
SHOX2-201ENST00000389589 GLO1Q04760 184 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms