RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 RASSF1Q9NS23 344 aa17.04■□□□□ 0.32
GTF3A-201ENST00000381140 SAMHD1Q9Y3Z3 626 aaKnown RBP17.04■□□□□ 0.32
GTF3A-201ENST00000381140 LYVE1Q9Y5Y7 322 aa17.04■□□□□ 0.32
GTF3A-201ENST00000381140 NBPF19A0A087WUL8 3843 aa17.04■□□□□ 0.32
GTF3A-201ENST00000381140 AKAP6Q13023 2319 aa17.04■□□□□ 0.32
GTF3A-201ENST00000381140 SH3PXD2BA1X283 911 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 OR5H1A6NKK0 313 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 G3V2T6 193 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 CDC42EP2O14613 210 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 SIAH2O43255 324 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 CSNK1A1P48729 337 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 HMGA2P52926 109 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 IST1P53990 364 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 PPA1Q15181 289 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 GABRA6Q16445 453 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 IZUMO2Q6UXV1 221 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 C20orf196Q8IYI0 205 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 CBR4Q8N4T8 237 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 OR4C15Q8NGM1 316 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 SLC29A1Q99808 456 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 OSBPL10Q9BXB5 764 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 CRLF2Q9HC73 371 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 GPR35Q9HC97 309 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 B3GAT2Q9NPZ5 323 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 HIF3AQ9Y2N7 669 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 APCP25054 2843 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 FBN2P35556 2912 aa17.03■□□□□ 0.32
GTF3A-201ENST00000381140 TNFRSF11BO00300 401 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 SOCS2O14508 198 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 OR10H3O60404 316 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 HRGP04196 525 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 HOXC12P31275 282 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 RPL4P36578 427 aaKnown RBP17.02■□□□□ 0.32
GTF3A-201ENST00000381140 OMPP47874 163 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 LIMS1P48059 325 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 SLC9A3P48764 834 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 ARHGDIAP52565 204 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 PPP1R8Q12972 351 aaKnown RBP17.02■□□□□ 0.32
GTF3A-201ENST00000381140 ACKR1Q16570 336 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 CEACAM16Q2WEN9 425 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 HIKESHIQ53FT3 197 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 TIMM23BQ5SRD1 257 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 OR7E24Q6IFN5 339 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 TMPRSS11FQ6ZWK6 438 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 TMEM179BQ7Z7N9 219 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 LURAP1Q96LR2 239 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 ADAD1Q96M93 576 aaKnown RBP17.02■□□□□ 0.32
GTF3A-201ENST00000381140 ZNF184Q99676 751 aaPredicted RBP17.02■□□□□ 0.32
GTF3A-201ENST00000381140 USB1Q9BQ65 265 aaKnown RBP17.02■□□□□ 0.32
GTF3A-201ENST00000381140 FUZQ9BT04 418 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 ULBP2Q9BZM5 246 aa17.02■□□□□ 0.32
GTF3A-201ENST00000381140 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.02■□□□□ 0.31
GTF3A-201ENST00000381140 DEFB108AA8MXU0 73 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 SEC14L2O76054 403 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 DAP3P51398 398 aaKnown RBP17.02■□□□□ 0.31
GTF3A-201ENST00000381140 CLRN1P58418 232 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 CTXN1P60606 82 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 RPS4XP62701 263 aaKnown RBP17.02■□□□□ 0.31
GTF3A-201ENST00000381140 ARF1P84077 181 aaKnown RBP17.02■□□□□ 0.31
GTF3A-201ENST00000381140 ZBED5Q49AG3 693 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 KLHL24Q6TFL4 600 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 CDC20BQ86Y33 519 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 OR1K1Q8NGR3 316 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 OR6X1Q8NH79 312 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 ASB10Q8WXI3 467 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 NRGNQ92686 78 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 ZNF566Q969W8 418 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 ZNF837Q96EG3 531 aaPredicted RBP17.02■□□□□ 0.31
GTF3A-201ENST00000381140 PLPPR2Q96GM1 343 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 MUS81Q96NY9 551 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 C1QTNF6Q9BXI9 259 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 USE1Q9NZ43 259 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 U3KQV3 271 aa17.02■□□□□ 0.31
GTF3A-201ENST00000381140 NOTCH2Q04721 2471 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 CADP27708 2225 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 HRNRQ86YZ3 2850 aaPredicted RBP17.01■□□□□ 0.31
GTF3A-201ENST00000381140 A0A096LPE4 126 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 A0A1W2PPZ6 126 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 UNC119BA6NIH7 251 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 EI24O14681 340 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 KLF4O43474 513 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 TSPAN19P0C672 248 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 ALDH3A2P51648 485 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 AQP4P55087 323 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 PPP2R2BQ00005 443 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 DAG1Q14118 895 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 BEX5Q5H9J7 111 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 P2RY8Q86VZ1 359 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 SYT14Q8NB59 555 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 C1orf162Q8NEQ5 155 aaPredicted RBP17.01■□□□□ 0.31
GTF3A-201ENST00000381140 DNAJC9Q8WXX5 260 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 SLC25A44Q96H78 314 aaPredicted RBP17.01■□□□□ 0.31
GTF3A-201ENST00000381140 HS3ST6Q96QI5 342 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 NGBQ9NPG2 151 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 SLC17A5Q9NRA2 495 aa17.01■□□□□ 0.31
GTF3A-201ENST00000381140 FAM221AA4D161 298 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 ARRDC5A6NEK1 342 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 IGHG1P01857 330 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 IFNGR2P38484 337 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 HSPA13P48723 471 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms