RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 ZBTB46Q86UZ6 589 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 SLC22A16Q86VW1 577 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 SMAP2Q8WU79 429 aaPredicted RBP17.54■□□□□ 0.4
CCM2-202ENST00000381112 RAB2BQ8WUD1 216 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 C12orf43Q96C57 262 aaKnown RBP17.54■□□□□ 0.4
CCM2-202ENST00000381112 KCNK17Q96T54 332 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 TIMP4Q99727 224 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 NAA11Q9BSU3 229 aaPredicted RBP17.54■□□□□ 0.4
CCM2-202ENST00000381112 NCKAP5O14513 1909 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 DAPL1A0PJW8 107 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 SCG5P05408 212 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 BIDP55957 195 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 ACTC1P68032 377 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 ACTA1P68133 377 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 KLHL36Q8N4N3 616 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 ZNF511Q8NB15 262 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 OR52N1Q8NH53 320 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 OR2V1Q8NHB1 315 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 UCN2Q96RP3 112 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 TBX5Q99593 518 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 TSPAN10Q9H1Z9 355 aaPredicted RBP17.54■□□□□ 0.4
CCM2-202ENST00000381112 SLC6A15Q9H2J7 730 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 ACKR4Q9NPB9 350 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 B9D1Q9UPM9 204 aa17.54■□□□□ 0.4
CCM2-202ENST00000381112 VAMP5O95183 116 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 NAA10P41227 235 aaPredicted RBP17.53■□□□□ 0.4
CCM2-202ENST00000381112 CD97P48960 835 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 LHX2P50458 406 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 CARD18P57730 90 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 GALEQ14376 348 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 ZNF322Q6U7Q0 402 aaPredicted RBP17.53■□□□□ 0.4
CCM2-202ENST00000381112 P2RY8Q86VZ1 359 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 SPACA3Q8IXA5 215 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 UBQLNLQ8IYU4 475 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 FAM109AQ8N4B1 249 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 GATAD2BQ8WXI9 593 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 EMC6Q9BV81 110 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 KLHL13Q9P2N7 655 aa17.53■□□□□ 0.4
CCM2-202ENST00000381112 CAB39Q9Y376 341 aaPredicted RBP17.53■□□□□ 0.4
CCM2-202ENST00000381112 IGLV1-36A0A0B4J1U3 117 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 IGHV3-15A0A0B4J1V0 119 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 TRAV17A0A0B4J275 112 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 A0A1W2PQL4 384 aaPredicted RBP17.52■□□□□ 0.4
CCM2-202ENST00000381112 AHCYL1O43865 530 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 SELENOFO60613 162 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 SLC16A7O60669 478 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 GABARAPO95166 117 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 OR2T7P0C7T2 308 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 CTLA4P16410 223 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 ZNF43P17038 809 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 ENPP1P22413 925 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 ZNF85Q03923 595 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 MLLT11Q13015 90 aaPredicted RBP17.52■□□□□ 0.4
CCM2-202ENST00000381112 POU4F3Q15319 338 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 CTF1Q16619 201 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 TSTQ16762 297 aaKnown RBP17.52■□□□□ 0.4
CCM2-202ENST00000381112 RNFT1Q5M7Z0 435 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 TRILQ7L0X0 811 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 SYT14Q8NB59 555 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 OR2T27Q8NH04 317 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 OR10D3Q8NH80 312 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 TM9SF4Q92544 642 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 ZHX1-C8orf76Q96EF9 292 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 ARHGAP9Q9BRR9 750 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 ALG8Q9BVK2 526 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 MRPL13Q9BYD1 178 aaKnown RBP17.52■□□□□ 0.4
CCM2-202ENST00000381112 RERGLQ9H628 205 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 ISYNA1Q9NPH2 558 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 DKK4Q9UBT3 224 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 PCDHGB7Q9Y5F8 929 aa17.52■□□□□ 0.4
CCM2-202ENST00000381112 TRIM64BA6NI03 449 aa17.52■□□□□ 0.39
CCM2-202ENST00000381112 ACOT7O00154 380 aa17.52■□□□□ 0.39
CCM2-202ENST00000381112 SMAD9O15198 467 aaKnown RBP17.52■□□□□ 0.39
CCM2-202ENST00000381112 NOL3O60936 208 aaKnown RBP17.52■□□□□ 0.39
CCM2-202ENST00000381112 HCCSP53701 268 aa17.52■□□□□ 0.39
CCM2-202ENST00000381112 SLC10A1Q14973 349 aa17.52■□□□□ 0.39
CCM2-202ENST00000381112 SSX1Q16384 188 aa17.52■□□□□ 0.39
CCM2-202ENST00000381112 C19orf48Q6RUI8 117 aa17.52■□□□□ 0.39
CCM2-202ENST00000381112 SLC35F2Q8IXU6 374 aa17.52■□□□□ 0.39
CCM2-202ENST00000381112 TIGD4Q8IY51 512 aa17.52■□□□□ 0.39
CCM2-202ENST00000381112 OR6X1Q8NH79 312 aa17.52■□□□□ 0.39
CCM2-202ENST00000381112 CCRL2O00421 344 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 CXCL13O43927 109 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 NR4A1P22736 598 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 CRABP1P29762 137 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 EIF2S3P41091 472 aaKnown RBP17.51■□□□□ 0.39
CCM2-202ENST00000381112 EIF1AXP47813 144 aaKnown RBP17.51■□□□□ 0.39
CCM2-202ENST00000381112 SLC17A1Q14916 467 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 IGFL3Q6UXB1 125 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 TMPRSS11AQ6ZMR5 421 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 ATCAYQ86WG3 371 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 SPRYD4Q8WW59 207 aaPredicted RBP17.51■□□□□ 0.39
CCM2-202ENST00000381112 BCL7BQ9BQE9 202 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 ZDHHC11Q9H8X9 412 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 MARCH7Q9H992 704 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 ISG20L2Q9H9L3 353 aaKnown RBP17.51■□□□□ 0.39
CCM2-202ENST00000381112 APC2O95996 2303 aa17.51■□□□□ 0.39
CCM2-202ENST00000381112 SLC35F4A4IF30 521 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 ATE1O95260 518 aa17.5■□□□□ 0.39
CCM2-202ENST00000381112 CLDN18P56856 261 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms