RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 FOXD3Q9UJU5 478 aaPredicted RBP16.61■□□□□ 0.25
SMN2-202ENST00000380742 ORC6Q9Y5N6 252 aa16.61■□□□□ 0.25
SMN2-202ENST00000380742 EEF1E1-BLOC1S5C9J1V9 151 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 DLGAP1O14490 977 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 MSTNO14793 375 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 ARHGEF9O43307 516 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 EEF1E1O43324 174 aaKnown RBP16.6■□□□□ 0.25
SMN2-202ENST00000380742 IDH3BO43837 385 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 SNAP29O95721 258 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 RAD23AP54725 363 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 KRR1Q13601 381 aaKnown RBP16.6■□□□□ 0.25
SMN2-202ENST00000380742 PGGHGQ32M88 737 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 FAM205BPQ63HN1 556 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 SLC27A4Q6P1M0 643 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 PTCHD4Q6ZW05 846 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 LINGO2Q7L985 606 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 LUZP2Q86TE4 346 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 C20orf196Q8IYI0 205 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 PACRGLQ8N7B6 248 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 TMEM54Q969K7 222 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 ZNF566Q969W8 418 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 MBOAT4Q96T53 435 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 KCNK17Q96T54 332 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 LINC00470Q9BZP3 86 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 TOR3AQ9H497 397 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 SLC25A19Q9HC21 320 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 ENOPH1Q9UHY7 261 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 BAIAP2Q9UQB8 552 aa16.6■□□□□ 0.25
SMN2-202ENST00000380742 A6NIZ1 184 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 ZAR1LA6NP61 321 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 A8MXE2 369 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 H7C1C5 153 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 IGHG1P01857 330 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 RNF224P0DH78 156 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 HIST1H1CP16403 213 aaKnown RBP16.59■□□□□ 0.25
SMN2-202ENST00000380742 AGAP20933 346 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 NOS3P29474 1203 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 GRK5P34947 590 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 CDKN2AP42771 156 aaKnown RBP16.59■□□□□ 0.25
SMN2-202ENST00000380742 RAP1BP61224 184 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 LCN6P62502 163 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 RAP1AP62834 184 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 MYBPC1Q00872 1141 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 ZNF362Q5T0B9 420 aaPredicted RBP16.59■□□□□ 0.25
SMN2-202ENST00000380742 FBXW9Q5XUX1 488 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 XKRXQ6PP77 449 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 ZNF474Q6S9Z5 364 aaPredicted RBP16.59■□□□□ 0.25
SMN2-202ENST00000380742 HDDC2Q7Z4H3 204 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 UBE2J2Q8N2K1 259 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 ZNF808Q8N4W9 903 aaPredicted RBP16.59■□□□□ 0.25
SMN2-202ENST00000380742 SYT14Q8NB59 555 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 OR4K13Q8NH42 304 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 LRR1Q96L50 414 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 C8orf4Q9NR00 106 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 MYO18BQ8IUG5 2567 aa16.59■□□□□ 0.25
SMN2-202ENST00000380742 CACNA1CQ13936 2221 aa16.58■□□□□ 0.25
SMN2-202ENST00000380742 TENM4Q6N022 2769 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 CLEC18AA5D8T8 446 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 WIPF3A6NGB9 483 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 FAM90A27PA6NNH2 459 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 CENPBD1B2RD01 187 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 E9PQ18 207 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 M0R3G1 203 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 AGFG2O95081 481 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 SLC2A10O95528 541 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 CDH2P19022 906 aaPredicted RBP16.58■□□□□ 0.24
SMN2-202ENST00000380742 CSNK1A1P48729 337 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 FOXG1P55316 489 aaPredicted RBP16.58■□□□□ 0.24
SMN2-202ENST00000380742 CLRN1P58418 232 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 HIST3H3Q16695 136 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 SLC25A35Q3KQZ1 300 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 CLEC18BQ6UXF7 455 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 POMGNT2Q8NAT1 580 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 CLEC18CQ8NCF0 446 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 NOXO1Q8NFA2 376 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 OR6N1Q8NGY5 312 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 CA5BP1Q8WTZ4 195 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 NMD3Q96D46 503 aaKnown RBP16.58■□□□□ 0.24
SMN2-202ENST00000380742 ALKBH3Q96Q83 286 aaPredicted RBP16.58■□□□□ 0.24
SMN2-202ENST00000380742 ALG12Q9BV10 488 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 GRIP2Q9C0E4 1043 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 GLTPQ9NZD2 209 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 UPB1Q9UBR1 384 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 MALT1Q9UDY8 824 aa16.58■□□□□ 0.24
SMN2-202ENST00000380742 PRSS37A4D1T9 235 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 NKX2-6A6NCS4 301 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 OR6C65A6NJZ3 312 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 XKRYO14609 159 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 PTDSS1P48651 473 aaKnown RBP16.57■□□□□ 0.24
SMN2-202ENST00000380742 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMN2-202ENST00000380742 FAPQ12884 760 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 SLX4IPQ5VYV7 408 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 LRFN4Q6PJG9 635 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 Q6ZT83 130 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 BEND4Q6ZU67 534 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 GABRG1Q8N1C3 465 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 GPR137CQ8N3F9 429 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 SDR9C7Q8NEX9 313 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 OR52E2Q8NGJ4 325 aa16.57■□□□□ 0.24
SMN2-202ENST00000380742 NMNAT3Q96T66 252 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms