RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 ZNF786Q8N393 782 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 FAM26EQ8N5C1 309 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 C9orf106Q8NAJ2 232 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 ST6GALNAC3Q8NDV1 305 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 BBS1Q8NFJ9 593 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 OR6N1Q8NGY5 312 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 APH1BQ8WW43 257 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 HDAC2Q92769 488 aaKnown RBP11.5□□□□□ -0.57
CBWD3-203ENST00000377344 INTS12Q96CB8 462 aaKnown RBP11.5□□□□□ -0.57
CBWD3-203ENST00000377344 OR2M2Q96R28 347 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 TM9SF2Q99805 663 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 HCAR1Q9BXC0 346 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 OR51V1Q9H2C8 321 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 BCO1Q9HAY6 547 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 SRA1Q9HD15 236 aaKnown RBP11.5□□□□□ -0.57
CBWD3-203ENST00000377344 ZNF835Q9Y2P0 537 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 FAM215AQ9Y5M1 114 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 SPTA1P02549 2419 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 GTF3C1Q12789 2109 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 ZNF724A8MTY0 619 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 WBP4O75554 376 aaKnown RBP11.49□□□□□ -0.57
CBWD3-203ENST00000377344 SMNDC1O75940 238 aaKnown RBP eCLIP11.49□□□□□ -0.57
CBWD3-203ENST00000377344 HOXD4P09016 255 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-203ENST00000377344 CLUP10909 449 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 GABRB1P18505 474 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 NUDT6P53370 316 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 SMN1Q16637 294 aaKnown RBP11.49□□□□□ -0.57
CBWD3-203ENST00000377344 RTL6Q6ICC9 239 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 B3GNT6Q6ZMB0 384 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 RPRMLQ8N4K4 120 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 NOXO1Q8NFA2 376 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 BPIFB6Q8NFQ5 453 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 PTP4A1Q93096 173 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 GMPPAQ96IJ6 420 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-203ENST00000377344 Q96MT0 163 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 TSSK2Q96PF2 358 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 RBP7Q96R05 134 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 KCNK17Q96T54 332 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 C12orf49Q9H741 205 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 AMBNQ9NP70 447 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 PARPBPQ9NWS1 579 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 SLC22A23A1A5C7 686 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 SLC16A7O60669 478 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 SLC43A1O75387 559 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 PGA4P0DJD7 388 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 PGA3P0DJD8 388 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 AGTR1P30556 359 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 NTF4P34130 210 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 CASP6P55212 293 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 SIRPAP78324 504 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 FMODQ06828 376 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 MEDAGQ5VYS4 303 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 NXNL2Q5VZ03 156 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 OR2A2Q6IF42 318 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 CNEP1R1Q8N9A8 125 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 OR51L1Q8NGJ5 315 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 ZNF582Q96NG8 517 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-203ENST00000377344 MRPL13Q9BYD1 178 aaKnown RBP11.49□□□□□ -0.57
CBWD3-203ENST00000377344 NUAK2Q9H093 628 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 GLRX2Q9NS18 164 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 ASB6Q9NWX5 421 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 RCE1Q9Y256 329 aa11.49□□□□□ -0.57
CBWD3-203ENST00000377344 TRGV8A0A0C4DH27 118 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 MBD3L4A6NDZ8 208 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-203ENST00000377344 MBD3L3A6NE82 208 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-203ENST00000377344 MBD3L5A6NJ08 208 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-203ENST00000377344 SNTNA6NMZ2 147 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 FAM171A2A8MVW0 826 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 M0R3G1 203 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 SS18L1O75177 396 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-203ENST00000377344 KRT33AO76009 404 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 ZNF432O94892 652 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 IL2RAP01589 272 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 IGHV3-9P01782 118 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 SPI1P17947 270 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 CSNK1A1P48729 337 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 CENPAP49450 140 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 CDH11P55287 796 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 LGALS3BPQ08380 585 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 APOFQ13790 326 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 OCLNQ16625 522 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 C6orf141Q5SZD1 244 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 AADACL4Q5VUY2 407 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 NUFIP2Q7Z417 695 aaKnown RBP11.48□□□□□ -0.57
CBWD3-203ENST00000377344 GID4Q8IVV7 300 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 ZNF100Q8IYN0 542 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 TMEM123Q8N131 208 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 PROKR2Q8NFJ6 384 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 OR2T4Q8NH00 348 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 MBD3L2Q8NHZ7 208 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-203ENST00000377344 FBLIM1Q8WUP2 373 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 NSMAFQ92636 917 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 RFKQ969G6 155 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 TMEM45BQ96B21 275 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 ALG12Q9BV10 488 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 GP6Q9HCN6 339 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 VSX1Q9NZR4 365 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-203ENST00000377344 EMC9Q9Y3B6 208 aa11.48□□□□□ -0.57
CBWD3-203ENST00000377344 PRODHO43272 600 aa11.47□□□□□ -0.57
CBWD3-203ENST00000377344 XPNPEP2O43895 674 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms