RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 DOCK10Q96BY6 2186 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 C11orf98E9PRG8 122 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 ZNF670-ZNF695F2Z2N8 137 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 H3BML4 177 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 TRAF3IP2O43734 574 aaPredicted RBP9.95□□□□□ -0.82
PDPN-202ENST00000376057 GPX5O75715 221 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 AKR7A3O95154 331 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 AHCYP23526 432 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 SERPINB10P48595 397 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 TGIF1Q15583 401 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 RAET1LQ5VY80 246 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 SPINK14Q6IE38 97 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 SULF2Q8IWU5 870 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 ZFP62Q8NB50 900 aaPredicted RBP9.95□□□□□ -0.82
PDPN-202ENST00000376057 INTS12Q96CB8 462 aaKnown RBP9.95□□□□□ -0.82
PDPN-202ENST00000376057 ZHX1-C8orf76Q96EF9 292 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 ZNF552Q9H707 407 aaPredicted RBP9.95□□□□□ -0.82
PDPN-202ENST00000376057 WDR76Q9H967 626 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 ACKR4Q9NPB9 350 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 ZMIZ1Q9ULJ6 1067 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 SSR3Q9UNL2 185 aa9.95□□□□□ -0.82
PDPN-202ENST00000376057 CLPXO76031 633 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 GYPBP06028 91 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 IFNGR1P15260 489 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 CD46P15529 392 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 SHC1P29353 583 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 SLC16A1P53985 500 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 VBP1P61758 197 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 FOXK1P85037 733 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 CDC20Q12834 499 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 DMKNQ6E0U4 476 aaPredicted RBP9.94□□□□□ -0.82
PDPN-202ENST00000376057 PLEKHG7Q6ZR37 379 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 TRILQ7L0X0 811 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 GGNQ86UU5 652 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 PM20D2Q8IYS1 436 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 SLC25A44Q96H78 314 aaPredicted RBP9.94□□□□□ -0.82
PDPN-202ENST00000376057 NUAK2Q9H093 628 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 OR51E2Q9H255 320 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 SYT4Q9H2B2 425 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 ETAA1Q9NY74 926 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 KIAA1549Q9HCM3 1950 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 PINLYPA6NC86 204 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 AQP8O94778 261 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 APOL3O95236 402 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 HLA-DPB1P04440 258 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 HLA-DOBP13765 273 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 ZNF182P17025 639 aaPredicted RBP9.94□□□□□ -0.82
PDPN-202ENST00000376057 KCNMB1Q16558 191 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 PDSS1Q5T2R2 415 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 VASNQ6EMK4 673 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 FDX2Q6P4F2 183 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 TEX19Q8NA77 164 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 ATP6V1C2Q8NEY4 427 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 RPL3LQ92901 407 aaKnown RBP9.94□□□□□ -0.82
PDPN-202ENST00000376057 C5orf34Q96MH7 638 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 INTS14Q96SY0 518 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 DCSTAMPQ9H295 470 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 KCNG2Q9UJ96 466 aa9.94□□□□□ -0.82
PDPN-202ENST00000376057 DCTN6O00399 190 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 LALBAP00709 142 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 IL1AP01583 271 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 TACSTD2P09758 323 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 RFPL3SP0C7P2 107 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 PGA4P0DJD7 388 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 PGA3P0DJD8 388 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 PAX7P23759 505 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 CD79BP40259 229 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 NCS1P62166 190 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 ROM1Q03395 351 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 GLO1Q04760 184 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 MOGQ16653 247 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 LIPKQ5VXJ0 399 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 RPL22L1Q6P5R6 122 aaKnown RBP9.93□□□□□ -0.82
PDPN-202ENST00000376057 OR14L1PQ8NHC6 308 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 NDNFQ8TB73 568 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 TBC1D15Q8TC07 691 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 PHYHIPQ92561 330 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 JSRP1Q96MG2 331 aaPredicted RBP9.93□□□□□ -0.82
PDPN-202ENST00000376057 ISG20L2Q9H9L3 353 aaKnown RBP9.93□□□□□ -0.82
PDPN-202ENST00000376057 PAQR5Q9NXK6 330 aaPredicted RBP9.93□□□□□ -0.82
PDPN-202ENST00000376057 ANKRD10Q9NXR5 420 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 ZNF292O60281 2723 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 ARGFXA6NJG6 315 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 KHDRBS3O75525 346 aaKnown RBP9.93□□□□□ -0.82
PDPN-202ENST00000376057 ALOX5APP20292 161 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 GPR85P60893 370 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 POU3F1Q03052 451 aaPredicted RBP9.93□□□□□ -0.82
PDPN-202ENST00000376057 B3GLCTQ6Y288 498 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 RHOUQ7L0Q8 258 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 LSRQ86X29 649 aaPredicted RBP9.93□□□□□ -0.82
PDPN-202ENST00000376057 MS4A15Q8N5U1 240 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 TMEM178AQ8NBL3 297 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 OR5M1Q8NGP8 315 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 OTOSQ8NHW6 89 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 CENPOQ9BU64 300 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 TTTY12Q9BZ98 90 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 SLIRPQ9GZT3 109 aaKnown RBP9.93□□□□□ -0.82
PDPN-202ENST00000376057 MMP27Q9H306 513 aa9.93□□□□□ -0.82
PDPN-202ENST00000376057 SRA1Q9HD15 236 aaKnown RBP9.93□□□□□ -0.82
PDPN-202ENST00000376057 ST6GALNAC2Q9UJ37 374 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms