RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 LRFN5Q96NI6 719 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ZNF559Q9BR84 538 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ZNF649Q9BS31 505 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 LMF2Q9BU23 707 aaKnown RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 SRRQ9GZT4 340 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 OR52D1Q9H346 318 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CDCP1Q9H5V8 836 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ANKRA2Q9H9E1 313 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 MOV10Q9HCE1 1003 aaKnown RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 ADAP2Q9NPF8 381 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 HINT3Q9NQE9 182 aaKnown RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 POLE4Q9NR33 117 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 INPP5EQ9NRR6 644 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 SNTG1Q9NSN8 517 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 HRASLS2Q9NWW9 162 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 NPAP1Q9NZP6 1156 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CD207Q9UJ71 328 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 BAIAP2Q9UQB8 552 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CARD8Q9Y2G2 431 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 NTNG1Q9Y2I2 539 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 GSTK1Q9Y2Q3 226 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 GRIP1Q9Y3R0 1128 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CMAHPQ9Y471 501 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CEP192Q8TEP8 1941 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 TRIOBPQ9H2D6 2365 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 MPDZO75970 2070 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 HEATR5AQ86XA9 2040 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 CCDC187A0A096LP49 1063 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 A0A0B4J2E0 115 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 SPTY2D1-AS1A0A0U1RR47 76 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 A0A1B0GX12 115 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 SHISA7A6NL88 538 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 TTC36A6NLP5 189 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 NPIPB9F8W1W9 429 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 H3BQ06 376 aaPredicted RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 WWP2O00308 870 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 PEX12O00623 359 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 BHLHE40O14503 412 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 SOCS6O14544 535 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 CDC42EP2O14613 210 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 CHP2O43745 196 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 LDB3O75112 727 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 LALBAP00709 142 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 HLA-DPB1P04440 258 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 EIF2S1P05198 315 aaKnown RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 THEGLP0DJG4 465 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 IL7P13232 177 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 PRG2P13727 222 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 PVRP15151 417 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 SPNP16150 400 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 IL11P20809 199 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 TBXA2RP21731 343 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 DRD5P21918 477 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 PTBP1P26599 531 aaKnown RBP eCLIP4.33□□□□□ -1.72
USP48-202ENST00000374730 RBM34P42696 430 aaKnown RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 EIF2B2P49770 351 aaKnown RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 BLKP51451 505 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 CCR9P51686 369 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 PSMD4P55036 377 aaKnown RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 FXYD6P3P58550 94 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 NANOS2P60321 138 aaKnown RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 PPP3R1P63098 170 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 HOXC5Q00444 222 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 ASAH1Q13510 395 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 FZD2Q14332 565 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 GPR68Q15743 365 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 ZNF79Q15937 498 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 PRTGQ2VWP7 1150 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 AMZ1Q400G9 498 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 GLYR1Q49A26 553 aaPredicted RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 CLEC12AQ5QGZ9 265 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 CCNJQ5T5M9 372 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 DDI2Q5TDH0 399 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 C22orf42Q6IC83 251 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 XKRXQ6PP77 449 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 ZNF322Q6U7Q0 402 aaPredicted RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 METAP1DQ6UB28 335 aaPredicted RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 CCBE1Q6UXH8 406 aaPredicted RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 WDR88Q6ZMY6 472 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 GDPD3Q7L5L3 318 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 PRSS41Q7RTY9 318 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 PARGQ86W56 976 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 LAX1Q8IWV1 398 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 OR4N5Q8IXE1 308 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 GDPD1Q8N9F7 314 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 SMRP1Q8NCR6 262 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 OR4F15Q8NGB8 312 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 SLC2A12Q8TD20 617 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 DNAJA4Q8WW22 397 aaPredicted RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 PATE1Q8WXA2 126 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 ANKRD9Q96BM1 317 aaPredicted RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 SAMD8Q96LT4 415 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 ZNF578Q96N58 590 aaPredicted RBP4.33□□□□□ -1.72
USP48-202ENST00000374730 ZNF285Q96NJ3 590 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 CD180Q99467 661 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 KCNS3Q9BQ31 491 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 CCDC3Q9BQI4 270 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 ZNF426Q9BUY5 554 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 KATNB1Q9BVA0 655 aa4.33□□□□□ -1.72
USP48-202ENST00000374730 TRIM2Q9C040 744 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms