RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MRM2Q9UI43 246 aaKnown RBP12.65□□□□□ -0.38
HMGCL-203ENST00000374490 LAMP5Q9UJQ1 280 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 SPAG17Q6Q759 2223 aa12.65□□□□□ -0.38
HMGCL-203ENST00000374490 ABCA7Q8IZY2 2146 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 GON4LQ3T8J9 2241 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 THADAQ6YHU6 1953 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 MEIKINA0A087WXM9 373 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF593O00488 134 aaPredicted RBP12.64□□□□□ -0.39
HMGCL-203ENST00000374490 KHNYNO15037 678 aaKnown RBP12.64□□□□□ -0.39
HMGCL-203ENST00000374490 PEX14O75381 377 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF254O75437 659 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 SNAPC5O75971 98 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 IGKV3-11P04433 115 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 SULT1A3P0DMM9 295 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 SULT1A4P0DMN0 295 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 IL12BP29460 328 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 HTR2BP41595 481 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 ART1P52961 327 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 EGR4Q05215 589 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 LTBQ06643 244 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 C19orf57Q0VDD7 668 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 ST3GAL2Q16842 350 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 LIPNQ5VXI9 398 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 MAMDC2Q7Z304 686 aaPredicted RBP12.64□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF433Q8N7K0 673 aaPredicted RBP12.64□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF511Q8NB15 262 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 OR11H7Q8NGC8 314 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 C1orf216Q8TAB5 229 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 GIMAP1Q8WWP7 306 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 ASB17Q8WXJ9 295 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 SNAPC3Q92966 411 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 RNF166Q96A37 237 aaPredicted RBP12.64□□□□□ -0.39
HMGCL-203ENST00000374490 ADIPOR1Q96A54 375 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 MIB2Q96AX9 1013 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 TSPAN32Q96QS1 320 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 LMF1Q96S06 567 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 INTS14Q96SY0 518 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 SLC25A18Q9H1K4 315 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 C20orf85Q9H1P6 137 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 ARRDC1-AS1Q9H2J1 176 aa12.64□□□□□ -0.39
HMGCL-203ENST00000374490 TMEM184BQ9Y519 407 aaPredicted RBP12.64□□□□□ -0.39
HMGCL-203ENST00000374490 GOLGA4Q13439 2230 aaKnown RBP12.63□□□□□ -0.39
HMGCL-203ENST00000374490 FRYLO94915 3013 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 TRBV5-7A0A0A0MS05 114 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 IGHV5-51A0A0C4DH38 117 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 OR6C76A6NM76 312 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 RHPN2P1A8MT19 583 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 LMO7DNF2Z398 122 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 ACOT7O00154 380 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 AGRPO00253 132 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 TGM6O95932 706 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 BGLAPP02818 100 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 MT-ND4P03905 459 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 PGCP20142 388 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 CXCR1P25024 350 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 CFPP27918 469 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 GRPRP30550 384 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 GFERP55789 205 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 C14orf28Q4W4Y0 310 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 MESTQ5EB52 335 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 TMEM69Q5SWH9 247 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 PWWP2BQ6NUJ5 590 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 FDX2Q6P4F2 183 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 CBLN3Q6UW01 205 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 STAC2Q6ZMT1 411 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 FCRLAQ7L513 359 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF227Q86WZ6 799 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 OR6V1Q8N148 313 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF721Q8TF20 911 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 DAZLQ92904 295 aaKnown RBP12.63□□□□□ -0.39
HMGCL-203ENST00000374490 RADILQ96JH8 1075 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 YIPF2Q9BWQ6 316 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 OR8D2Q9GZM6 311 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 LIN7BQ9HAP6 207 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 HRASLSQ9HDD0 168 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 B3GNT2Q9NY97 397 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 SCP2D1Q9UJQ7 156 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 IKZF2Q9UKS7 526 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 FOXJ3Q9UPW0 622 aa12.63□□□□□ -0.39
HMGCL-203ENST00000374490 FAM171A2A8MVW0 826 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 PRR32B1ATL7 298 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 IDSB3KWA1 339 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 SMLR1H3BR10 107 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 XKRYO14609 159 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 SDC3O75056 442 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 KHDRBS3O75525 346 aaKnown RBP12.62□□□□□ -0.39
HMGCL-203ENST00000374490 RPP14O95059 124 aaKnown RBP12.62□□□□□ -0.39
HMGCL-203ENST00000374490 DDAH2O95865 285 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 F13BP05160 661 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF806P0C7X5 589 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 GP1BBP13224 206 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF24P17028 368 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 PSMB1P20618 241 aaKnown RBP12.62□□□□□ -0.39
HMGCL-203ENST00000374490 MST1P26927 711 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 DHPSP49366 369 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-203ENST00000374490 ARL4DP49703 201 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 CCR6P51684 374 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 ZNF117Q03924 483 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 COL28A1Q2UY09 1125 aa12.62□□□□□ -0.39
HMGCL-203ENST00000374490 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms