RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 CELA2AP08217 269 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 PYCR1P32322 319 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 EIF3IQ13347 325 aaKnown RBP11.28□□□□□ -0.6
PRPF4-202ENST00000374199 ASB17Q8WXJ9 295 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 MR1Q95460 341 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 RHBDL2Q9NX52 303 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 GRIP1Q9Y3R0 1128 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 NCKAP5O14513 1909 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 TEX51A0A1B0GUA7 166 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 PIN1P1O15428 100 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 SLC19A2O60779 497 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 AQP8O94778 261 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 FOLR3P41439 243 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 BCAP31P51572 246 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 CCR9P51686 369 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 RUNX1T1Q06455 604 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 ASAH1Q13510 395 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 C3orf33Q6P1S2 294 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 C6orf15Q6UXA7 325 aaPredicted RBP11.28□□□□□ -0.6
PRPF4-202ENST00000374199 ZNF227Q86WZ6 799 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 PM20D2Q8IYS1 436 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 RHBDD1Q8TEB9 315 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 ITFG2Q969R8 447 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 OTULINQ96BN8 352 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 KLHL15Q96M94 604 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 CCDC86Q9H6F5 360 aaKnown RBP11.28□□□□□ -0.6
PRPF4-202ENST00000374199 CYSLTR2Q9NS75 346 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 TMEM14AQ9Y6G1 99 aa11.28□□□□□ -0.6
PRPF4-202ENST00000374199 PMS2P2O95744 297 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 LIFP15018 202 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 NAA10P41227 235 aaPredicted RBP11.27□□□□□ -0.61
PRPF4-202ENST00000374199 DAP3P51398 398 aaKnown RBP11.27□□□□□ -0.61
PRPF4-202ENST00000374199 SELENBP1Q13228 472 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 ATP1A4Q13733 1029 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 BTBD16Q32M84 506 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 ACSM3Q53FZ2 586 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 ZNF511Q8NB15 262 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 OR51L1Q8NGJ5 315 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 CT55Q8WUE5 264 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 ATOH1Q92858 354 aaPredicted RBP11.27□□□□□ -0.61
PRPF4-202ENST00000374199 SYT4Q9H2B2 425 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 HDGFL3Q9Y3E1 203 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 KIF26BQ2KJY2 2108 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 TP53I11O14683 189 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 FAM157BP0CG42 384 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 CTLA4P16410 223 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 ACVR1BP36896 505 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 POU4F3Q15319 338 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 SLC26A10Q8NG04 563 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 OR8B4Q96RC9 309 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 INTS14Q96SY0 518 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 NEURL2Q9BR09 285 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 STRADBQ9C0K7 418 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 FRRS1LQ9P0K9 344 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 ZNF281Q9Y2X9 895 aa11.27□□□□□ -0.61
PRPF4-202ENST00000374199 PMS2P1A4D2B8 440 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 OR4C45A6NMZ5 311 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 ZNF254O75437 659 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 SHC1P29353 583 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 ZNF41P51814 821 aaPredicted RBP11.26□□□□□ -0.61
PRPF4-202ENST00000374199 B3GALT5-AS1P59052 145 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 KCNMB1Q16558 191 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 BAK1Q16611 211 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 SFXN4Q6P4A7 337 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 FOXL2NBQ6ZUU3 175 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 PLCZ1Q86YW0 608 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 ZNF454Q8N9F8 522 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 THAP3Q8WTV1 239 aaPredicted RBP11.26□□□□□ -0.61
PRPF4-202ENST00000374199 MIB2Q96AX9 1013 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 RNF31Q96EP0 1072 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 ZC3HAV1LQ96H79 300 aaKnown RBP11.26□□□□□ -0.61
PRPF4-202ENST00000374199 DERL3Q96Q80 235 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 KLHL9Q9P2J3 617 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 DAPK2Q9UIK4 370 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 C21orf140B9A014 251 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 CASKO14936 926 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 ZIC3O60481 467 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 PFDN1O60925 122 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 ZFPL1O95159 310 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 ICAM2P13598 275 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 RFX2P48378 723 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 MYBPHQ13203 477 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 ARL9Q6T311 187 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 PRSS35Q8N3Z0 413 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 PSMF1Q92530 271 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 GPR87Q9BY21 358 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 KLRF1Q9NZS2 232 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 TRAF3IP2O43734 574 aaPredicted RBP11.26□□□□□ -0.61
PRPF4-202ENST00000374199 TACSTD2P09758 323 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 CSF3P09919 207 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 NPR2P20594 1047 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 CRABP1P29762 137 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 SSR4P51571 173 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 MXD1Q05195 221 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 CEACAM19Q7Z692 300 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 SLC22A16Q86VW1 577 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 C10orf53Q8N6V4 93 aa11.26□□□□□ -0.61
PRPF4-202ENST00000374199 ST7LQ8TDW4 575 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms