RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 FPR2P25090 351 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 ETV4P43268 484 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 RAD52P43351 418 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 KLF3P57682 345 aaPredicted RBP13.06□□□□□ -0.32
SSR4-204ENST00000370087 SRSF4Q08170 494 aaKnown RBP13.06□□□□□ -0.32
SSR4-204ENST00000370087 LARS2Q15031 903 aaKnown RBP13.06□□□□□ -0.32
SSR4-204ENST00000370087 TSTQ16762 297 aaKnown RBP13.06□□□□□ -0.32
SSR4-204ENST00000370087 AGBL2Q5U5Z8 902 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 TMEM154Q6P9G4 183 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 WDR88Q6ZMY6 472 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 NUDCD3Q8IVD9 361 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 ADPRHL1Q8NDY3 354 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 LRR1Q96L50 414 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 OR52E6Q96RD3 313 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 NUF2Q9BZD4 464 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 NKIRAS1Q9NYS0 192 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 LEF1Q9UJU2 399 aaPredicted RBP13.06□□□□□ -0.32
SSR4-204ENST00000370087 PRDM4Q9UKN5 801 aa13.06□□□□□ -0.32
SSR4-204ENST00000370087 SOX21Q9Y651 276 aaPredicted RBP13.06□□□□□ -0.32
SSR4-204ENST00000370087 TRAV36DV7A0A075B6V5 113 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 A0A087WUJ7 227 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 A0A1B0GWA3 101 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 BIRC5O15392 142 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 BGLAPP02818 100 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 SERPINA5P05154 406 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 NUDT7P0C024 238 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 LBPP18428 481 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 MDKP21741 143 aaPredicted RBP13.05□□□□□ -0.32
SSR4-204ENST00000370087 CRISP3P54108 245 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 DSTNP60981 165 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
SSR4-204ENST00000370087 PCGF3Q3KNV8 242 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 SPRNQ5BIV9 151 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 HHATQ5VTY9 493 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 MIER2Q8N344 545 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 SLC30A7Q8NEW0 376 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 BHLHE22Q8NFJ8 381 aaPredicted RBP13.05□□□□□ -0.32
SSR4-204ENST00000370087 SYNPRQ8TBG9 265 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 SLC38A4Q969I6 547 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 VPS33AQ96AX1 596 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 SLC41A3Q96GZ6 507 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 MOGAT1Q96PD6 335 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 SORT1Q99523 831 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 GAL3ST1Q99999 423 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 MMP26Q9NRE1 261 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 AIG1Q9NVV5 245 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 NKIRAS2Q9NYR9 191 aa13.05□□□□□ -0.32
SSR4-204ENST00000370087 WDR91A4D1P6 747 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 OR2T1O43869 369 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 SERPINI2O75830 405 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 RNASE1P07998 156 aaKnown RBP13.04□□□□□ -0.32
SSR4-204ENST00000370087 NQO1P15559 274 aaKnown RBP13.04□□□□□ -0.32
SSR4-204ENST00000370087 GATA3P23771 443 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 CRATP43155 626 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 SLC18A1P54219 525 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 ABCE1P61221 599 aaKnown RBP13.04□□□□□ -0.32
SSR4-204ENST00000370087 BAMBIQ13145 260 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 LEG1Q6P5S2 330 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 RBMS3Q6XE24 437 aaKnown RBP13.04□□□□□ -0.32
SSR4-204ENST00000370087 KIRREL3Q8IZU9 778 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 OR6N1Q8NGY5 312 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 SNX33Q8WV41 574 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 SH3GL3Q99963 347 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 PAIP2Q9BPZ3 127 aaKnown RBP13.04□□□□□ -0.32
SSR4-204ENST00000370087 DENND2DQ9H6A0 471 aaPredicted RBP13.04□□□□□ -0.32
SSR4-204ENST00000370087 SAP30LQ9HAJ7 183 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 B3GAT2Q9NPZ5 323 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 DCAF16Q9NXF7 216 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 CALML5Q9NZT1 146 aa13.04□□□□□ -0.32
SSR4-204ENST00000370087 TMEM120BA0PK00 339 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
SSR4-204ENST00000370087 RFXANKO14593 260 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
SSR4-204ENST00000370087 KRT75O95678 551 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 LCKP06239 509 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 OR8G3PP0DMU2 310 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 IL13RA1P78552 427 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 RBBP4Q09028 425 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 MMEL1Q495T6 779 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 SLC22A24Q8N4F4 322 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 ANKRD42Q8N9B4 389 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 MAL2Q969L2 176 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 TLCD1Q96CP7 247 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 ATP6V1G3Q96LB4 118 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 C12orf10Q9HB07 376 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 TCF7L2Q9NQB0 619 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 UBAP1Q9NZ09 502 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 RPS6KB2Q9UBS0 482 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 NUP50Q9UKX7 468 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 RAP2CQ9Y3L5 183 aa13.03□□□□□ -0.32
SSR4-204ENST00000370087 A0A0G2JPF8 293 aa13.02□□□□□ -0.33
SSR4-204ENST00000370087 ISPDA4D126 451 aa13.02□□□□□ -0.33
SSR4-204ENST00000370087 HNRNPCL2B2RXH8 293 aa13.02□□□□□ -0.33
SSR4-204ENST00000370087 HNRNPCL3B7ZW38 293 aa13.02□□□□□ -0.33
SSR4-204ENST00000370087 TRAPPC2LH3BP13 241 aa13.02□□□□□ -0.33
SSR4-204ENST00000370087 SDHDO14521 159 aa13.02□□□□□ -0.33
SSR4-204ENST00000370087 HNRNPCL1O60812 293 aaKnown RBP13.02□□□□□ -0.33
SSR4-204ENST00000370087 IGHV1-46P01743 117 aa13.02□□□□□ -0.33
SSR4-204ENST00000370087 HNRNPCL4P0DMR1 293 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms