RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 STT3BQ8TCJ2 826 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 FAM46AQ96IP4 442 aaKnown RBP9.63□□□□□ -0.87
PRDM1-201ENST00000369089 F2RL3Q96RI0 385 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 TIMM29Q9BSF4 260 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 NRIP3Q9NQ35 241 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 POLR1DQ9Y2S0 133 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 UBR2Q8IWV8 1755 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 YJEFN3A6XGL0 299 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 HLA-DQB1P01920 261 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 OR12D1P0DN82 309 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 CD96P40200 585 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 ERVFC1-1P60608 527 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 BCDIN3DQ7Z5W3 292 aaKnown RBP9.63□□□□□ -0.87
PRDM1-201ENST00000369089 TMEM173Q86WV6 379 aaPredicted RBP9.63□□□□□ -0.87
PRDM1-201ENST00000369089 OR4K1Q8NGD4 311 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 CLEC4CQ8WTT0 213 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 EDAQ92838 391 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 FUBP1Q96AE4 644 aaKnown RBP9.63□□□□□ -0.87
PRDM1-201ENST00000369089 SOX7Q9BT81 388 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 TUBB1Q9H4B7 451 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 KCNK12Q9HB15 430 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 TMEM9BQ9NQ34 198 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 ETV7Q9Y603 341 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 SLC33A1O00400 549 aaPredicted RBP9.63□□□□□ -0.87
PRDM1-201ENST00000369089 TMIGD3P0DMS9 266 aaPredicted RBP9.63□□□□□ -0.87
PRDM1-201ENST00000369089 RAB11AP62491 216 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 HERPUD1Q15011 391 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 ASB17Q8WXJ9 295 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 WNT2BQ93097 391 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 ORAI1Q96D31 301 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 C4orf36Q96KX1 117 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 MRGPRX2Q96LB1 330 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 STEAP1Q9UHE8 339 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 FBXW11Q9UKB1 542 aa9.63□□□□□ -0.87
PRDM1-201ENST00000369089 ZNF814B7Z6K7 855 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 TRAPPC6AO75865 159 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 SNAI1O95863 264 aaPredicted RBP9.62□□□□□ -0.87
PRDM1-201ENST00000369089 PDYNP01213 254 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 TBPP20226 339 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 MSX1P28360 303 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 UBE2G2P60604 165 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 HTD2P86397 168 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 CLN3Q13286 438 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 ZNF101Q8IZC7 436 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 SCLYQ96I15 445 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 SPACA7Q96KW9 195 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 JSRP1Q96MG2 331 aaPredicted RBP9.62□□□□□ -0.87
PRDM1-201ENST00000369089 TMEM208Q9BTX3 173 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 LPAR3Q9UBY5 353 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 KCNG2Q9UJ96 466 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 TRBV11-1A0A0K0K1C0 115 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 CR2P20023 1033 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 BMP5P22003 454 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 SERPINA4P29622 427 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 HTR5AP47898 357 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 FAAP20Q6NZ36 180 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 SLC16A14Q7RTX9 510 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 FAM181AQ8N9Y4 354 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 OR5R1Q8NH85 324 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 TMEM37Q8WXS4 190 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 RLIMQ9NVW2 624 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 COL2A1P02458 1487 aaPredicted RBP9.62□□□□□ -0.87
PRDM1-201ENST00000369089 COL18A1P39060 1754 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 RAB27BO00194 218 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 MOSPD3O75425 235 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 NSG1P42857 185 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 EIPR1Q53HC9 387 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 SYT14P1Q58G82 188 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 C8orf82Q6P1X6 216 aaPredicted RBP9.62□□□□□ -0.87
PRDM1-201ENST00000369089 FAM151BQ6UXP7 276 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 ZNF429Q86V71 674 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 NPAS4Q8IUM7 802 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 GCNT2Q8N0V5 402 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 TOMM40LQ969M1 308 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 RAB33BQ9H082 229 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 GNG13Q9P2W3 67 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 EXOGQ9Y2C4 368 aaKnown RBP9.62□□□□□ -0.87
PRDM1-201ENST00000369089 DCDC2BA2VCK2 349 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 LRP5LA4QPB2 252 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 J3KTA2 159 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 OR2J2O76002 312 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 TTRP02766 147 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 GALP22466 123 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 UQCRC2P22695 453 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 GABRR1P24046 479 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 SLC6A6P31641 620 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 KRTDAPP60985 99 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 INPP5JQ15735 1006 aaPredicted RBP9.62□□□□□ -0.87
PRDM1-201ENST00000369089 MIDNQ504T8 468 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 MOB3CQ70IA8 216 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 CFAP52Q8N1V2 620 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 ZNF417Q8TAU3 575 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 FAM46BQ96A09 425 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 CNN2Q99439 309 aaKnown RBP9.62□□□□□ -0.87
PRDM1-201ENST00000369089 BCO2Q9BYV7 579 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 REG4Q9BYZ8 158 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 ZCCHC3Q9NUD5 404 aaKnown RBP9.62□□□□□ -0.87
PRDM1-201ENST00000369089 CACNG4Q9UBN1 327 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 IL20RAQ9UHF4 553 aa9.62□□□□□ -0.87
PRDM1-201ENST00000369089 IQCF5A8MTL0 148 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms