RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C1DQ13901 141 aaKnown RBP12.27□□□□□ -0.45
VAMP4-202ENST00000367740 ESCO2Q56NI9 601 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 MRPL2Q5T653 305 aaKnown RBP12.27□□□□□ -0.45
VAMP4-202ENST00000367740 LRRN1Q6UXK5 716 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 LCA5Q86VQ0 697 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 CLECL1Q8IZS7 167 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 ICA1LQ8NDH6 482 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 DACT3Q96B18 629 aaPredicted RBP12.27□□□□□ -0.45
VAMP4-202ENST00000367740 SLC25A36Q96CQ1 311 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 NEURL3Q96EH8 262 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 POFUT2Q9Y2G5 429 aa12.27□□□□□ -0.45
VAMP4-202ENST00000367740 IGHV2-70DA0A0C4DH43 119 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 TMEM114B3SHH9 223 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 AKAP8O43823 692 aaKnown RBP12.26□□□□□ -0.45
VAMP4-202ENST00000367740 FZD7O75084 574 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 TGDSO95455 350 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 SNRPAP09012 282 aaKnown RBP12.26□□□□□ -0.45
VAMP4-202ENST00000367740 RPS4Y1P22090 263 aaKnown RBP12.26□□□□□ -0.45
VAMP4-202ENST00000367740 HPCAP84074 193 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 PMS2P3Q13401 168 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 ZMYND11Q15326 602 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 MOGQ16653 247 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 GPAT3Q53EU6 434 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 BTNL3Q6UXE8 466 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 Q6ZSV7 163 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 SKA3Q8IX90 412 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 CADM2Q8N3J6 435 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 CPEB3Q8NE35 698 aaKnown RBP12.26□□□□□ -0.45
VAMP4-202ENST00000367740 SSMEM1Q8WWF3 244 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 FAM71F1Q96KD3 344 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-202ENST00000367740 DUSP26Q9BV47 211 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 MECRQ9BV79 373 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 SLC38A1Q9H2H9 487 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 CDH20Q9HBT6 801 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 TCF7L2Q9NQB0 619 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 ZDHHC18Q9NUE0 388 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 EMCNQ9ULC0 261 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 GPR45Q9Y5Y3 372 aa12.26□□□□□ -0.45
VAMP4-202ENST00000367740 AZIN1O14977 448 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 MFN2O95140 757 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 SNAP29O95721 258 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 ADH4P08319 380 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 GKN3PP0CG01 181 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 GTF2E2P29084 291 aaKnown RBP12.25□□□□□ -0.45
VAMP4-202ENST00000367740 ACAA2P42765 397 aaKnown RBP12.25□□□□□ -0.45
VAMP4-202ENST00000367740 RPS5P46782 204 aaKnown RBP12.25□□□□□ -0.45
VAMP4-202ENST00000367740 UCP2P55851 309 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 NAA20P61599 178 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 EGR4Q05215 589 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 WBP2NLQ6ICG8 309 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 ZNF774Q6NX45 483 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 C6orf89Q6UWU4 347 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 ZYG11AQ6WRX3 759 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 LRRC28Q86X40 367 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-202ENST00000367740 RIMKLAQ8IXN7 391 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 ZSCAN4Q8NAM6 433 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-202ENST00000367740 STK35Q8TDR2 534 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 SGCDQ92629 289 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 CCDC126Q96EE4 140 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 LRR1Q96L50 414 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 NAPGQ99747 312 aaPredicted RBP12.25□□□□□ -0.45
VAMP4-202ENST00000367740 EMC6Q9BV81 110 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 BCL2L14Q9BZR8 327 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 EGLN1Q9GZT9 426 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 RAB17Q9H0T7 212 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 C16orf95Q9H693 158 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 TMEM106BQ9NUM4 274 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 RLIMQ9NVW2 624 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 LRCH1Q9Y2L9 728 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 DNAJC15Q9Y5T4 150 aa12.25□□□□□ -0.45
VAMP4-202ENST00000367740 A0A096LPI6 279 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 M0R082 166 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 DHHO43323 396 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 MYL2P10916 166 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 BTG1P62324 171 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 DBPQ10586 325 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-202ENST00000367740 KANK2Q63ZY3 851 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 ATG16L1Q676U5 607 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 TIFABQ6ZNK6 161 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 C1orf174Q8IYL3 243 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 SPATA4Q8NEY3 305 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 ZNF417Q8TAU3 575 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 PNPT1Q8TCS8 783 aaKnown RBP12.24□□□□□ -0.45
VAMP4-202ENST00000367740 IPCEF1Q8WWN9 437 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-202ENST00000367740 ZNF587Q96SQ5 575 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-202ENST00000367740 C1orf50Q9BV19 199 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 SSBP3Q9BWW4 388 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-202ENST00000367740 ULBP2Q9BZM5 246 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 B3GAT2Q9NPZ5 323 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-202ENST00000367740 TRIM33Q9UPN9 1127 aa12.24□□□□□ -0.45
VAMP4-202ENST00000367740 PLSCR5A0PG75 271 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 CEACAM18A8MTB9 384 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 AIM2O14862 343 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 LYPLA1O75608 230 aaPredicted RBP12.23□□□□□ -0.45
VAMP4-202ENST00000367740 HPRP00739 348 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 IGHV4-59P01825 116 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 CD55P08174 381 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 THRBP10828 461 aa12.23□□□□□ -0.45
VAMP4-202ENST00000367740 HLA-DOBP13765 273 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms