RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 MMP11P24347 488 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 CCR5P51681 352 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 C21orf58P58505 322 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 FAM53BQ14153 422 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 ANKRD33BA6NCL7 494 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 CTXN2P0C2S0 81 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 H1FNTQ75WM6 255 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 TRAPPC6BQ86SZ2 158 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 DNAJC5GQ8N7S2 189 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 SENP5Q96HI0 755 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 A6NCN8 305 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 LUMP51884 338 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 RBMS3Q6XE24 437 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 OR52H1Q8NGJ2 320 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 TMEM43Q9BTV4 400 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 NCDNQ9UBB6 729 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 POU2F3Q9UKI9 436 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 SURF4O15260 269 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 GPR85P60893 370 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 DOC2BQ14184 412 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 VRK3Q8IV63 474 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 TERB2Q8NHR7 220 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 CNTNAP3Q9BZ76 1288 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 NGBQ9NPG2 151 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 CCL26Q9Y258 94 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 SLC34A2O95436 690 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 GPR157Q5UAW9 335 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 SLAMF9Q96A28 289 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 NKX2-4Q9H2Z4 354 aa11.1□□□□□ -0.63
CDC42BPA-203ENST00000366766 HIDE1A8MVS5 230 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 VEGFBP49765 207 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 DPY19L4Q7Z388 723 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 CMSS1Q9BQ75 279 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 PSME4Q14997 1843 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 TAAR5O14804 337 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 CTHP32929 405 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 ZNF764Q96H86 408 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 PTRH2Q9Y3E5 179 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 MPDZO75970 2070 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 KIR2DS1A0A191URI9 304 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 ALDH3B1P43353 468 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 KIR2DS4P43632 304 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 GAB1Q13480 694 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 CRMP1Q14194 572 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 KIR2DS1Q14954 304 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 KMT5CQ86Y97 462 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 SLCO4A1Q96BD0 722 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 SLC35A4Q96G79 324 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 OR2F2O95006 317 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 PRR35P0CG20 571 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 OR2F1Q13607 317 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 TNFRSF13CQ96RJ3 184 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 HOXC5Q00444 222 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 SIAH3Q8IW03 269 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 DEFB119Q8N690 84 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 TECTBQ96PL2 329 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 OR5M11Q96RB7 305 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 UBL7Q96S82 380 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 MBOAT4Q96T53 435 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 SNRPGP15A8MWD9 76 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 MCRIP1C9JLW8 97 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 MTCP1P56278 107 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 FXYD4P59646 89 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 DCAF12Q5T6F0 453 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 MRPL38Q96DV4 380 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 OR52A5Q9H2C5 316 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 C4orf47A7E2U8 309 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 LCN6P62502 163 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 EEF1A1P68104 462 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 GABREP78334 506 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 CTU2Q2VPK5 515 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 NPSR1Q6W5P4 371 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 ESX1Q8N693 406 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 FAM171A2A8MVW0 826 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 MSTNO14793 375 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 OR8G3PP0DMU2 310 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 CD22P20273 847 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 THBS3P49746 956 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 TPBGQ13641 420 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 IL10RAQ13651 578 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 PAPD4Q6PIY7 484 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 ZNF761Q86XN6 746 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 SLC16A11Q8NCK7 471 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 CHRNA9Q9UGM1 479 aa11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 GPR55Q9Y2T6 319 aaPredicted RBP11.09□□□□□ -0.63
CDC42BPA-203ENST00000366766 MRPL33O75394 65 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 IDH3GP51553 393 aaPredicted RBP11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 C1orf140Q5VVS0 124 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZNF611Q8N823 705 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 RELTQ969Z4 430 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 PAPOLGQ9BWT3 736 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 RNF150Q9ULK6 438 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 SCRG1O75711 98 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 CD27P26842 260 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 RNF175Q8N4F7 328 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 DYNC2LI1Q8TCX1 351 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 RBMXL1Q96E39 390 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 ZDHHC5Q9C0B5 715 aa11.08□□□□□ -0.64
CDC42BPA-203ENST00000366766 TRAV1-2A0A0B4J238 106 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms