RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 PNPLA6Q8IY17 1366 aa2.2□□□□□ -2.06
RNU4-28P-201ENST00000364739 ARPC3O15145 178 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 RBFOX2O43251 390 aaKnown RBP eCLIP2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 GAPDHP04406 335 aaKnown RBP2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 HSMCR30P0CW71 290 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 SMIM10L1P0DMW3 83 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 RORAP35398 523 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 GPR6P46095 362 aaPredicted RBP2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 CYB561P49447 251 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 BPIFB3P59826 476 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 POLR2FP61218 127 aaKnown RBP2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 ESRRGP62508 458 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 HSP90AA5PQ58FG0 334 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 OSR2Q8N2R0 312 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 MREGQ8N565 214 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 MFSD9Q8NBP5 474 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 PYROXD1Q8WU10 500 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 SMIM10Q96HG1 83 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 SENP8Q96LD8 212 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 RPP21Q9H633 154 aaKnown RBP2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 MCCC2Q9HCC0 563 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 BFARQ9NZS9 450 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 KIAA1257Q9ULG3 409 aa2.19□□□□□ -2.06
RNU4-28P-201ENST00000364739 IGKV4-1P06312 121 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 CCR8P51685 355 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 SUB1P53999 127 aaKnown RBP eCLIP2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 CDK16Q00536 496 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 PHYHD1Q5SRE7 291 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 OR4F3Q6IEY1 312 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 DNAJC24Q6P3W2 148 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 NTM-AS1Q6ZSK4 140 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 BIVMQ86UB2 503 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 VSTM4Q8IW00 320 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 OR10G4Q8NGN3 311 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 DTNBP1Q96EV8 351 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 TTC25Q96NG3 672 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 OSBPL11Q9BXB4 747 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 RAB33BQ9H082 229 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 SLC35D1Q9NTN3 355 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 EXD2Q9NVH0 621 aa2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.18□□□□□ -2.06
RNU4-28P-201ENST00000364739 TNS2Q63HR2 1409 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 MBLAC1A4D2B0 266 aaPredicted RBP2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 CCDC182A6NF36 153 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 SGK1O00141 431 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 TBX19O60806 448 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 IDH1O75874 414 aaKnown RBP2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 GABARAPO95166 117 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 IQCF3P0C7M6 154 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 FOLR1P15328 257 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 TCN1P20061 433 aaPredicted RBP2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 OPRD1P41143 372 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 DUSP3P51452 185 aaPredicted RBP2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 PON3Q15166 354 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 CDC37Q16543 378 aaPredicted RBP2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 POU2AF1Q16633 256 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 FILIP1LQ4L180 1135 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 SFT2D3Q587I9 215 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 DNLZQ5SXM8 178 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 TRIM40Q6P9F5 258 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 ZNF493Q6ZR52 646 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 H2AFVQ71UI9 128 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 WDR86Q86TI4 376 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 NUDCD3Q8IVD9 361 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 PUSL1Q8N0Z8 303 aaKnown RBP2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 LGI3Q8N145 548 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 MAGEE2Q8TD90 523 aaPredicted RBP2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 RARRES2Q99969 163 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 FAIM2Q9BWQ8 316 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 MRPL47Q9HD33 250 aaKnown RBP2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 SMOXQ9NWM0 555 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 ZNRD1Q9P1U0 126 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 PTBP2Q9UKA9 531 aaKnown RBP2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 KIF16BQ96L93 1317 aa2.17□□□□□ -2.06
RNU4-28P-201ENST00000364739 ANKRD12Q6UB98 2062 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 IGHV5-10-1A0A0J9YXX1 117 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 UPK3AO75631 287 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 B3GALNT1O75752 331 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 CRYBB1P53674 252 aaPredicted RBP2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 NCBP1Q09161 790 aaKnown RBP2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 ELP6Q0PNE2 266 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 ERCC8Q13216 396 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 KLHL38Q2WGJ6 581 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 PDZK1Q5T2W1 519 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 UQCC3Q6UW78 93 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 BRD3OSQ6XYD6 125 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 RGP1Q92546 391 aaPredicted RBP2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 RBM14Q96PK6 669 aaKnown RBP2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 PSG8Q9UQ74 426 aa2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 MRPS18BQ9Y676 258 aaKnown RBP2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 CENPJQ9HC77 1338 aaPredicted RBP2.16□□□□□ -2.06
RNU4-28P-201ENST00000364739 SCN1AP35498 2009 aa2.15□□□□□ -2.06
RNU4-28P-201ENST00000364739 ZNF726A6NNF4 738 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 HIDE1A8MVS5 230 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 K7EQM0 130 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 RRP8O43159 456 aaKnown RBP2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 CCNKO75909 580 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 FABP3P05413 133 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 HSPA5P11021 654 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms