RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 LHX8Q68G74 356 aa18.65■□□□□ 0.58
CDC42BPB-201ENST00000361246 MBOAT2Q6ZWT7 520 aa18.65■□□□□ 0.58
CDC42BPB-201ENST00000361246 CBLL1Q75N03 491 aa18.65■□□□□ 0.58
CDC42BPB-201ENST00000361246 OR7G1Q8NGA0 311 aa18.65■□□□□ 0.58
CDC42BPB-201ENST00000361246 KIF25Q9UIL4 384 aa18.65■□□□□ 0.58
CDC42BPB-201ENST00000361246 TTC3P53804 2025 aa18.65■□□□□ 0.58
CDC42BPB-201ENST00000361246 NRAPQ86VF7 1730 aa18.64■□□□□ 0.58
CDC42BPB-201ENST00000361246 PRRC2BQ5JSZ5 2229 aaKnown RBP18.64■□□□□ 0.58
CDC42BPB-201ENST00000361246 GABARAPL2P60520 117 aa18.64■□□□□ 0.58
CDC42BPB-201ENST00000361246 ARL16Q0P5N6 197 aa18.64■□□□□ 0.58
CDC42BPB-201ENST00000361246 CRYBA1P05813 215 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 GK3PQ14409 553 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 MEP1BQ16820 701 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 GCNT2Q8N0V5 402 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 GAB3Q8WWW8 586 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 BSCL2Q96G97 398 aaPredicted RBP18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 GNG13Q9P2W3 67 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 CGGBP1Q9UFW8 167 aaPredicted RBP18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 GIPRP48546 466 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 NOVP48745 357 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 FJX1Q86VR8 437 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 GGHQ92820 318 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 CSF1P09603 554 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 ELAVL4P26378 380 aaKnown RBP18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 SLC19A1P41440 591 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 HLCSP50747 726 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 CRMP1Q14194 572 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 FAM43BQ6ZT52 329 aaPredicted RBP18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 ELP4Q96EB1 424 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 A0A1W2PPC4 97 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 SPRY3O43610 288 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 PLRG1O43660 514 aaKnown RBP18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 DPM1O60762 260 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 TP53P04637 393 aaPredicted RBP18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 EIF1P41567 113 aaKnown RBP18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 FABP6P51161 128 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 HACD4Q5VWC8 232 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 Q6ZTK2 550 aa18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 SMAP2Q8WU79 429 aaPredicted RBP18.64■□□□□ 0.57
CDC42BPB-201ENST00000361246 NOTOA8MTQ0 251 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 GABARAPH6UMI1 98 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 SLCO2B1O94956 709 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 GABARAPO95166 117 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 ASTLQ6HA08 431 aaPredicted RBP18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 KLF13Q9Y2Y9 288 aaPredicted RBP18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 CDK1P06493 297 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 ALDH3B2P48448 385 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 P2RX1P51575 399 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 RPS25P62851 125 aaKnown RBP18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 C6orf89Q6UWU4 347 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 TRUB1Q8WWH5 349 aaKnown RBP18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 FOXRED1Q96CU9 486 aaPredicted RBP18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 M0R082 166 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 CXCL13O43927 109 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 ACP2P11117 423 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 MRPS34P82930 218 aaKnown RBP18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 ZFAND1Q8TCF1 268 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 PINX1Q96BK5 328 aaKnown RBP18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 NMNAT2Q9BZQ4 307 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 C20orf27Q9GZN8 174 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 NIPAL2Q9H841 368 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 BABAM2Q9NXR7 383 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 TMEM9Q9P0T7 183 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 PRDM4Q9UKN5 801 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 FAM109BQ6ICB4 259 aaPredicted RBP18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 RPS10P5Q9NQ39 176 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 TNFRSF10AO00220 468 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 PCSK6P29122 969 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 BCL7AQ4VC05 210 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 COQ5Q5HYK3 327 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 OGFOD3Q6PK18 319 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 ADGRG5Q8IZF4 528 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 H0YIV9 168 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 RAB40BQ12829 278 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 TMPRSS7Q7RTY8 843 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 CHCHD4Q8N4Q1 142 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 CA5BP1Q8WTZ4 195 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 LINC01599Q8WXQ3 324 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 ELMOD3Q96FG2 381 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 SHARPINQ9H0F6 387 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 LAMA4Q16363 1823 aa18.63■□□□□ 0.57
CDC42BPB-201ENST00000361246 SGCEO43556 437 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 PRKACBP22694 351 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 HTR2BP41595 481 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 KEAP1Q14145 624 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 ZNF420Q8TAQ5 688 aaPredicted RBP18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 B3GAT1Q9P2W7 334 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 F8W036 122 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 PHF1O43189 567 aaPredicted RBP18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 PENKP01210 267 aaPredicted RBP18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 MGST1P10620 155 aaKnown RBP18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 GABRA4P48169 554 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 BLOC1S1P78537 153 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 ARHGAP11BQ3KRB8 267 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 ATPAF1Q5TC12 328 aaPredicted RBP18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 SEC22AQ96IW7 307 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 IER2Q9BTL4 223 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 SLC38A1Q9H2H9 487 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 KIAA0100Q14667 2235 aaKnown RBP18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 H1FNTQ75WM6 255 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms