RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RND1Q92730 232 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 CCDC120Q96HB5 630 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 KCNK17Q96T54 332 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 PITX2Q99697 317 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 ADI1Q9BV57 179 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 MRPL13Q9BYD1 178 aaKnown RBP22.46■■□□□ 1.19
SSBP3-202ENST00000357475 NDRG4Q9ULP0 352 aaKnown RBP22.46■■□□□ 1.19
SSBP3-202ENST00000357475 BAIAP2Q9UQB8 552 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 GPR52Q9Y2T5 361 aa22.46■■□□□ 1.19
SSBP3-202ENST00000357475 PRKYO43930 277 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 CTSSP25774 331 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 TSPO2Q5TGU0 170 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 TMEM211Q6ICI0 200 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 LINGO2Q7L985 606 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 DHRSXQ8N5I4 330 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 OR6K3Q8NGY3 331 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 ADAD1Q96M93 576 aaKnown RBP22.45■■□□□ 1.18
SSBP3-202ENST00000357475 ZFP3Q96NJ6 502 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 DDOQ99489 341 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 AASSQ9UDR5 926 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 RNF6Q9Y252 685 aa22.45■■□□□ 1.18
SSBP3-202ENST00000357475 SLC16A6O15403 523 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 IDH3BO43837 385 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 CGAP01215 116 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 GNAO1P09471 354 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 GGT2P36268 569 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 FMODQ06828 376 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 CRMP1Q14194 572 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 LEG1Q6P5S2 330 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 TFAP2EQ6VUC0 442 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 SLC37A3Q8NCC5 494 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 NPEPL1Q8NDH3 523 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 ZNF566Q969W8 418 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 APH1AQ96BI3 265 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 OPN3Q9H1Y3 402 aaPredicted RBP22.44■■□□□ 1.18
SSBP3-202ENST00000357475 RASSF4Q9H2L5 321 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 CMC2Q9NRP2 79 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 FOXD3Q9UJU5 478 aaPredicted RBP22.44■■□□□ 1.18
SSBP3-202ENST00000357475 GMPPBQ9Y5P6 360 aa22.44■■□□□ 1.18
SSBP3-202ENST00000357475 IGKV1D-43A0A0B4J1Z2 117 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 OR6C68A6NDL8 312 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 FAM183AA6NL82 134 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 H0YJX3 145 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 BMP5P22003 454 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 C4orf17Q53FE4 359 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 C20orf196Q8IYI0 205 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 NOXO1Q8NFA2 376 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 FAM81AQ8TBF8 368 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 TMEM54Q969K7 222 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 ALKBH3Q96Q83 286 aaPredicted RBP22.43■■□□□ 1.18
SSBP3-202ENST00000357475 HCAR1Q9BXC0 346 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 MED20Q9H944 212 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 SLC7A10Q9NS82 523 aa22.43■■□□□ 1.18
SSBP3-202ENST00000357475 DIDO1Q9BTC0 2240 aaKnown RBP22.43■■□□□ 1.18
SSBP3-202ENST00000357475 A0A1B0GUH1 482 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 SLC22A23A1A5C7 686 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 PRSS37A4D1T9 235 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 A6NIZ1 184 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 HSPB2A8KAH6 182 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 M0R3G1 203 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 XKRYO14609 159 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 IGHG1P01857 330 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 CRHP06850 196 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 CAPGP40121 348 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 OR3A2P47893 321 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 FOXG1P55316 489 aaPredicted RBP22.42■■□□□ 1.18
SSBP3-202ENST00000357475 CLRN1P58418 232 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 RAP1BP61224 184 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 RAP1AP62834 184 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 EFNB1P98172 346 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 HSPB2Q16082 182 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 SNAPC1Q16533 368 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 BCDIN3DQ7Z5W3 292 aaKnown RBP22.42■■□□□ 1.18
SSBP3-202ENST00000357475 JAZF1Q86VZ6 243 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 ZNF100Q8IYN0 542 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 RELL2Q8NC24 303 aaPredicted RBP22.42■■□□□ 1.18
SSBP3-202ENST00000357475 ZNF555Q8NEP9 628 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 TFAP2CQ92754 450 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 NMD3Q96D46 503 aaKnown RBP22.42■■□□□ 1.18
SSBP3-202ENST00000357475 ZNF837Q96EG3 531 aaPredicted RBP22.42■■□□□ 1.18
SSBP3-202ENST00000357475 TSSK2Q96PF2 358 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 IL4I1Q96RQ9 567 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 SFXN3Q9BWM7 321 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 SYT4Q9H2B2 425 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 SLCO5A1Q9H2Y9 848 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 PARPBPQ9NWS1 579 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 ZNF226Q9NYT6 803 aa22.42■■□□□ 1.18
SSBP3-202ENST00000357475 AKAP8O43823 692 aaKnown RBP22.41■■□□□ 1.18
SSBP3-202ENST00000357475 SLC43A1O75387 559 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 SMNDC1O75940 238 aaKnown RBP eCLIP22.41■■□□□ 1.185e-8■■■□□ 15.6
SSBP3-202ENST00000357475 HMGN1P05114 100 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 CLUP10909 449 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 CD47Q08722 323 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 CDSNQ15517 529 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 HIST3H3Q16695 136 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 FAM205BPQ63HN1 556 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 LRFN4Q6PJG9 635 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 TCEANCQ8N8B7 351 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 ZNF610Q8N9Z0 462 aa22.41■■□□□ 1.18
SSBP3-202ENST00000357475 HINT3Q9NQE9 182 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms