RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 ACVR1BP36896 505 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 RPS11P62280 158 aaKnown RBP eCLIP11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 POU4F2Q12837 409 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 IL11RAQ14626 422 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 ARHGAP11BQ3KRB8 267 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 NKAIN1Q4KMZ8 207 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 EIPR1Q53HC9 387 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 RNASE12Q5GAN4 147 aaKnown RBP11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 MFSD12Q6NUT3 480 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 TFAP2EQ6VUC0 442 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 RPTNQ6XPR3 784 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 GLDNQ6ZMI3 551 aaPredicted RBP11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 THSD4Q6ZMP0 1018 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 COX15Q7KZN9 410 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 PRSS45Q7RTY3 260 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 SYS1Q8N2H4 156 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 SLC16A11Q8NCK7 471 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 PHYHIPQ92561 330 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 RBM18Q96H35 190 aaKnown RBP11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 IFT27Q9BW83 186 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 CDCP1Q9H5V8 836 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 ADAP2Q9NPF8 381 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 PNO1Q9NRX1 252 aaKnown RBP11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 LANCL2Q9NS86 450 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 GLS2Q9UI32 602 aa11.52□□□□□ -0.56
RTFDC1-202ENST00000357348 A0A1W2PNU3 283 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 MCRIP1C9JLW8 97 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 GABARAPH6UMI1 98 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 PTP4A3O75365 173 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 ATP1B1P05026 303 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 FTH1P19P0C7X4 201 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 JMJD7P0C870 316 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 FGF5P12034 268 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 IL32P24001 234 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 HTR2AP28223 471 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 RAP2BP61225 183 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 MC2RQ01718 297 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 CDK5R1Q15078 307 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 TMEM255AQ5JRV8 349 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 B3GNTL1Q67FW5 361 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 FAM198BQ6UWH4 519 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 ESPNLQ6ZVH7 1005 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 ZNF595Q8IYB9 648 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 CMTM4Q8IZR5 234 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 OR13C5Q8NGS8 318 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 STT3BQ8TCJ2 826 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 TMEM239Q8WW34 195 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 CDS1Q92903 461 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 SMIM19Q96E16 107 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 MS4A4EQ96PG1 132 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 STRADBQ9C0K7 418 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 BRD7Q9NPI1 651 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 PPIEQ9UNP9 301 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 FLVCR2Q9UPI3 526 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 BAIAP2Q9UQB8 552 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 MRPS7Q9Y2R9 242 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 CLDN16Q9Y5I7 305 aa11.52□□□□□ -0.57
RTFDC1-202ENST00000357348 AHCTF1Q8WYP5 2266 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 SNRPGP15A8MWD9 76 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 KRBOX1C9JBD0 128 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 SULT1B1O43704 296 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 FMO6PO60774 539 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 TSPAN9O75954 239 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 TFP02787 698 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 NMBP08949 121 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 ATF4P18848 351 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 FUT1P19526 365 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 NOS3P29474 1203 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 MNDAP41218 407 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 AP3S2P59780 193 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 DCDP81605 110 aaKnown RBP11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 PRICKLE4Q2TBC4 344 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 EXOSC6Q5RKV6 272 aaKnown RBP11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 ARSKQ6UWY0 536 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 CHMP1BQ7LBR1 199 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 SSX6Q7RTT6 188 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 RANBP3LQ86VV4 465 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 PFN4Q8NHR9 129 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 LGALS14Q8TCE9 139 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 DGAT2Q96PD7 388 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 NRIP3Q9NQ35 241 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 C20orf141Q9NUB4 165 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 ANKRD10Q9NXR5 420 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 TAS2R5Q9NYW4 299 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 ICAM5Q9UMF0 924 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 NUP210LQ5VU65 1888 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 IGHV3-20A0A0C4DH32 117 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 TOR1AO14656 332 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 PRKNO60260 465 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 HRGP04196 525 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 PYCR1P32322 319 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 VEGFCP49767 419 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 NHLH1Q02575 133 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 NSDHLQ15738 373 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 TUSC1Q2TAM9 212 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 LANCL3Q6ZV70 420 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 SLC43A2Q8N370 569 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 RPS4Y2Q8TD47 263 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 RIT1Q92963 219 aa11.51□□□□□ -0.57
RTFDC1-202ENST00000357348 DACT3Q96B18 629 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms