RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 MAN2C1Q9NTJ4 1040 aa14.46□□□□□ -0.09
PDLIM7-201ENST00000355572 ZNF229Q9UJW7 825 aa14.46□□□□□ -0.09
PDLIM7-201ENST00000355572 ZNF726A6NNF4 738 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 FFAR1O14842 300 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 RNF13O43567 381 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 CD5LO43866 347 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 OR7A10O76100 309 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 NPPAP01160 153 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 MT-ND1P03886 318 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 TSPAN19P0C672 248 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 UMPSP11172 480 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 CD79AP11912 226 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 GIPRP48546 466 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 EFNA4P52798 201 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 SEC24CP53992 1094 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 TAS2R41P59536 307 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 MAPRE2Q15555 327 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 ERICH5Q6P6B1 374 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 CDK20Q8IZL9 346 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 SVOPLQ8N434 492 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 NUP37Q8NFH4 326 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 TPD52L3Q96J77 140 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 DOK1Q99704 481 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 SH3GL1Q99961 368 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 SH3GL3Q99963 347 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 RHNO1Q9BSD3 238 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 PLK3Q9H4B4 646 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 GLTPQ9NZD2 209 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 RHCGQ9UBD6 479 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 POFUT2Q9Y2G5 429 aa14.45□□□□□ -0.1
PDLIM7-201ENST00000355572 ELOVL7A1L3X0 281 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 BLOC1S5-TXNDC5H3BN57 136 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 CRLF1O75462 422 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 OR5F1O95221 314 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 F12P00748 615 aaPredicted RBP14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 ZNF35P13682 527 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 ARR3P36575 388 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 PTDSS1P48651 473 aaKnown RBP14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 SLC7A2P52569 658 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 LIPEQ05469 1076 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 SNTB2Q13425 540 aaKnown RBP14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 FHL1Q13642 323 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 RAB39AQ14964 217 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 LAPTM4AQ15012 233 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 EFNB3Q15768 340 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 GSG1Q2KHT4 349 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 TMEM249Q2WGJ8 235 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 CLEC2AQ6UVW9 174 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 NANOGNBQ7Z5D8 188 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 LRP11Q86VZ4 500 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 PAQR4Q8N4S7 273 aaPredicted RBP14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 TMEM239Q8WW34 195 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 ASB10Q8WXI3 467 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 FAM168AQ92567 244 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 MDFIQ99750 246 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 VRK1Q99986 396 aaPredicted RBP14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 MRPL13Q9BYD1 178 aaKnown RBP14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 SLC19A3Q9BZV2 496 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 MED4Q9NPJ6 270 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 TMEM38BQ9NVV0 291 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 MYEF2Q9P2K5 600 aaKnown RBP14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 BAG5Q9UL15 447 aa14.44□□□□□ -0.1
PDLIM7-201ENST00000355572 hCG_2039718K7EN88 272 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 TRMUO75648 421 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 PRSS23O95084 383 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 NCK1P16333 377 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 MAKP20794 623 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 CHRNB3Q05901 458 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 FMODQ06828 376 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 HIST3H3Q16695 136 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 CLDN22Q8N7P3 220 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 PCYOX1LQ8NBM8 494 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 RP9Q8TA86 221 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 RASSF5Q8WWW0 418 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 HDAC2Q92769 488 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 MCHR2Q969V1 340 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 NMD3Q96D46 503 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 SGTBQ96EQ0 304 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 SLC25A44Q96H78 314 aaPredicted RBP14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 SEPHS2Q99611 448 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 KCNS3Q9BQ31 491 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 SOX7Q9BT81 388 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 MRPL37Q9BZE1 423 aaKnown RBP14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 MYLK2Q9H1R3 596 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 ZNF442Q9H7R0 627 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 YAE1D1Q9NRH1 226 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 GID8Q9NWU2 228 aa14.43□□□□□ -0.1
PDLIM7-201ENST00000355572 SH3PXD2BA1X283 911 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 B9A039 149 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 SLC22A2O15244 555 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 DHHO43323 396 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 PDE5AO76074 875 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 OR6A2O95222 327 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 SLC2A10O95528 541 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 QDPRP09417 244 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 CCL2P13500 99 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 GSK3BP49841 420 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 SNRPD2P62316 118 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 RAB1AP62820 205 aa14.42□□□□□ -0.1
PDLIM7-201ENST00000355572 SELENOWP63302 87 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms