RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PLPP6Q8IY26 295 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 STT3BQ8TCJ2 826 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 SLC25A43Q8WUT9 341 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-202ENST00000355480 SPINT2O43291 252 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 EIF4E2O60573 245 aaKnown RBP16.6■□□□□ 0.25
COL18A1-202ENST00000355480 BCKDHBP21953 392 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 GDNFP39905 211 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 GRB2P62993 217 aaKnown RBP16.6■□□□□ 0.25
COL18A1-202ENST00000355480 SFXN4Q6P4A7 337 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 GATA6Q92908 595 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 ABHD6Q9BV23 337 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF225Q9UK10 706 aa16.6■□□□□ 0.25
COL18A1-202ENST00000355480 THBS3P49746 956 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 GLYR1Q49A26 553 aaPredicted RBP16.59■□□□□ 0.25
COL18A1-202ENST00000355480 AMBRA1Q9C0C7 1298 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 TMEM38AQ9H6F2 299 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 PSORS1C1Q9UIG5 152 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 PRELID3BQ9Y3B1 194 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 TARM1B6A8C7 271 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 P2RX1P51575 399 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 BAXQ07812 192 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 SMIM15Q7Z3B0 74 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 SLC46A3Q7Z3Q1 461 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 MAML2Q8IZL2 1156 aaPredicted RBP16.59■□□□□ 0.25
COL18A1-202ENST00000355480 KDM8Q8N371 416 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 FAM71CQ8NEG0 241 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 OR56B4Q8NH76 319 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 RPL3LQ92901 407 aaKnown RBP16.59■□□□□ 0.25
COL18A1-202ENST00000355480 DEFB127Q9H1M4 99 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 ACSM1Q08AH1 577 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 GDPD3Q7L5L3 318 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 ZNF436Q9C0F3 470 aaPredicted RBP16.59■□□□□ 0.25
COL18A1-202ENST00000355480 POM121BA6NF01 834 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 MRPS34P82930 218 aaKnown RBP16.59■□□□□ 0.25
COL18A1-202ENST00000355480 PLA2G7Q13093 441 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 TRMT12Q53H54 448 aaKnown RBP16.59■□□□□ 0.25
COL18A1-202ENST00000355480 C9orf152Q5JTZ5 239 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 CD300LGQ6UXG3 332 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 TCTEX1D2Q8WW35 142 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 UTP4Q969X6 686 aaKnown RBP16.59■□□□□ 0.25
COL18A1-202ENST00000355480 UHRF2Q96PU4 802 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 CNTNAP3Q9BZ76 1288 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 EGLN1Q9GZT9 426 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 COA3Q9Y2R0 106 aaPredicted RBP16.59■□□□□ 0.25
COL18A1-202ENST00000355480 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
COL18A1-202ENST00000355480 SCG5P05408 212 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 SNRNP70P08621 437 aaKnown RBP16.58■□□□□ 0.25
COL18A1-202ENST00000355480 TMEM11P17152 192 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 EMG1Q92979 244 aaKnown RBP16.58■□□□□ 0.25
COL18A1-202ENST00000355480 MS4A6EQ96DS6 147 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 DIMT1Q9UNQ2 313 aaKnown RBP16.58■□□□□ 0.25
COL18A1-202ENST00000355480 PRRT4C9JH25 899 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 PRRG2O14669 202 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 EFSO43281 561 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 SELENOFO60613 162 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 RGS11O94810 467 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 TRIM23P36406 574 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 HNF4GQ14541 408 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 PFN4Q8NHR9 129 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 PATE1Q8WXA2 126 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 NIPSNAP1Q9BPW8 284 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 BARHL1Q9BZE3 327 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 GPATCH2Q9NW75 528 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 NRXN3Q9Y4C0 1643 aa16.58■□□□□ 0.25
COL18A1-202ENST00000355480 NWD2Q9ULI1 1742 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 UBR2Q8IWV8 1755 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 GABARAPH6UMI1 98 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 GABARAPO95166 117 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 APOBEC1P41238 236 aaKnown RBP16.58■□□□□ 0.24
COL18A1-202ENST00000355480 RPS27AP62979 156 aaKnown RBP16.58■□□□□ 0.24
COL18A1-202ENST00000355480 UBA52P62987 128 aaKnown RBP16.58■□□□□ 0.24
COL18A1-202ENST00000355480 MC2RQ01718 297 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 DUSP5Q16690 384 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 YOD1Q5VVQ6 348 aaPredicted RBP16.58■□□□□ 0.24
COL18A1-202ENST00000355480 BCDIN3DQ7Z5W3 292 aaKnown RBP16.58■□□□□ 0.24
COL18A1-202ENST00000355480 MUTYHQ9UIF7 546 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 DAPP1Q9UN19 280 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 MTNR1BP49286 362 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 SMAD4Q13485 552 aaKnown RBP16.58■□□□□ 0.24
COL18A1-202ENST00000355480 SPRED1Q7Z699 444 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.58■□□□□ 0.241e-6■□□□□ 9.7
COL18A1-202ENST00000355480 SLC5A10A0PJK1 596 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 ZIC2O95409 532 aaPredicted RBP16.58■□□□□ 0.24
COL18A1-202ENST00000355480 RPS2P15880 293 aaKnown RBP16.58■□□□□ 0.24
COL18A1-202ENST00000355480 TGM4P49221 684 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 RAB11AP62491 216 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 YIF1BQ5BJH7 314 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 ITPKCQ96DU7 683 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 GON4LQ3T8J9 2241 aa16.58■□□□□ 0.24
COL18A1-202ENST00000355480 MAP2K6P52564 334 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 RAP2BP61225 183 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 SLC22A25Q6T423 547 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 RSPO2Q6UXX9 243 aaPredicted RBP16.57■□□□□ 0.24
COL18A1-202ENST00000355480 C1QTNF6Q9BXI9 259 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 P2RY12Q9H244 342 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 TXNL4BQ9NX01 149 aaKnown RBP16.57■□□□□ 0.24
COL18A1-202ENST00000355480 RGPD2P0DJD1 1756 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 IDSB3KWA1 339 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 H7C1Q1 480 aa16.57■□□□□ 0.24
COL18A1-202ENST00000355480 GLCEO94923 617 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms