RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 CNOT2Q9NZN8 540 aaKnown RBP10.25□□□□□ -0.77
CDRT1-202ENST00000354433 MED31Q9Y3C7 131 aa10.25□□□□□ -0.77
CDRT1-202ENST00000354433 PCNX3Q9H6A9 2034 aa10.25□□□□□ -0.77
CDRT1-202ENST00000354433 A0A1B0GWA3 101 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 A0A1W2PNR3 127 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 DEFB108AA8MXU0 73 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 PTGES3LE9PB15 166 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 SEC14L2O76054 403 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 SOX14O95416 240 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 PIPP12273 146 aaPredicted RBP10.24□□□□□ -0.77
CDRT1-202ENST00000354433 PCMT1P22061 227 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 PCYT1AP49585 367 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 SH3BGRP55822 239 aaPredicted RBP10.24□□□□□ -0.77
CDRT1-202ENST00000354433 PMS2P3Q13401 168 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 GINS1Q14691 196 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 RAB39AQ14964 217 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 RNPS1Q15287 305 aaKnown RBP10.24□□□□□ -0.77
CDRT1-202ENST00000354433 MEDAGQ5VYS4 303 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 TMEM236Q5W0B7 351 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 SLC27A4Q6P1M0 643 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 FCRLAQ7L513 359 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 CDK20Q8IZL9 346 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 TMEM234Q8WY98 164 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 MUL1Q969V5 352 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 MBD6Q96DN6 1003 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 OR5B2Q96R09 309 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 ACTR6Q9GZN1 396 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 PLSCR4Q9NRQ2 329 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 SELENONQ9NZV5 590 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 KLHL13Q9P2N7 655 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 RPS6KB2Q9UBS0 482 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 CDH10Q9Y6N8 788 aa10.24□□□□□ -0.77
CDRT1-202ENST00000354433 EFCAB10A6NFE3 127 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 H3BSA7 217 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 SIAH2O43255 324 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 IGF2P01344 180 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 PGCP20142 388 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 COPZ1P61923 177 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 LSM11P83369 360 aaKnown RBP eCLIP10.23□□□□□ -0.77
CDRT1-202ENST00000354433 EFNB1P98172 346 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 SKP2Q13309 424 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 SMN1Q16637 294 aaKnown RBP10.23□□□□□ -0.77
CDRT1-202ENST00000354433 ALG10BQ5I7T1 473 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 WFDC8Q8IUA0 241 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 TUSC5Q8IXB3 177 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 OR13F1Q8NGS4 319 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 ST8SIA1Q92185 356 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 FCGR1BQ92637 280 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 TMIGD2Q96BF3 282 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 SLC38A2Q96QD8 506 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 CCL19Q99731 98 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 COPS4Q9BT78 406 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 LAT2Q9GZY6 243 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 CXorf56Q9H5V9 222 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 C12orf10Q9HB07 376 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 SERINC1Q9NRX5 453 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 KLHL9Q9P2J3 617 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 ERVK-18Q9QC07 812 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 AASSQ9UDR5 926 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 RSL24D1Q9UHA3 163 aaKnown RBP10.23□□□□□ -0.77
CDRT1-202ENST00000354433 COMMD3-BMI1R4GMX3 469 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 ZNF469Q96JG9 3925 aaPredicted RBP10.23□□□□□ -0.77
CDRT1-202ENST00000354433 ABCA4P78363 2273 aa10.23□□□□□ -0.77
CDRT1-202ENST00000354433 ZFHX3Q15911 3703 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 UNC119BA6NIH7 251 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 ZNF99A8MXY4 864 aaPredicted RBP10.22□□□□□ -0.77
CDRT1-202ENST00000354433 EFNA2O43921 213 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 PIP5K1CO60331 668 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 HMGN1P05114 100 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 CDK1P06493 297 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 IGFBP1P08833 259 aaPredicted RBP10.22□□□□□ -0.77
CDRT1-202ENST00000354433 TFPIP10646 304 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 PPP3CBP16298 524 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 CD53P19397 219 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 ENPP1P22413 925 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 IL32P24001 234 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 DCKP27707 260 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 SLC15A1P46059 708 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 EMX1Q04741 257 aaPredicted RBP10.22□□□□□ -0.77
CDRT1-202ENST00000354433 NEDD8Q15843 81 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 BEX5Q5H9J7 111 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 WBP2NLQ6ICG8 309 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 STAC2Q6ZMT1 411 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 WDR88Q6ZMY6 472 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 ZNF620Q6ZNG0 422 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 WFDC11Q8NEX6 87 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 SGCDQ92629 289 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 GGHQ92820 318 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 HS3ST6Q96QI5 342 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 DOK1Q99704 481 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 TMUB1Q9BVT8 246 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 SLC19A3Q9BZV2 496 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 CCDC90BQ9GZT6 254 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 BEX4Q9NWD9 120 aaPredicted RBP10.22□□□□□ -0.77
CDRT1-202ENST00000354433 SPIN1Q9Y657 262 aaPredicted RBP10.22□□□□□ -0.77
CDRT1-202ENST00000354433 HRNRQ86YZ3 2850 aaPredicted RBP10.22□□□□□ -0.77
CDRT1-202ENST00000354433 C2CD3Q4AC94 2353 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 PRRC2AP48634 2157 aaKnown RBP10.22□□□□□ -0.77
CDRT1-202ENST00000354433 A0A087WUJ7 227 aa10.22□□□□□ -0.77
CDRT1-202ENST00000354433 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms