RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 SYNPRQ8TBG9 265 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 METTL21AQ8WXB1 218 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 RELTQ969Z4 430 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 PTDSS2Q9BVG9 487 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 RABL2AQ9UBK7 228 aaPredicted RBP19.71■□□□□ 0.75
SHMT1-202ENST00000352886 ZNF222Q9UK12 451 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 RABL2BQ9UNT1 228 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 HSPB11Q9Y547 144 aa19.71■□□□□ 0.75
SHMT1-202ENST00000352886 CABIN1Q9Y6J0 2220 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 A0A1B0GTQ1 180 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 A0A1B0GX78 115 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 H3BSH0 61 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 H2AFB2P0C5Z0 115 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 CBFBQ13951 182 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 ODF4Q2M2E3 257 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 PWWP2BQ6NUJ5 590 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 LRRC69Q6ZNQ3 347 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 ZNF676Q8N7Q3 588 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 DNAAF1Q8NEP3 725 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 CCDC74AQ96AQ1 378 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 HYLS1Q96M11 299 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 OR2M2Q96R28 347 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 AMELYQ99218 206 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 MNTQ99583 582 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 TTYH1Q9H313 450 aaPredicted RBP19.7■□□□□ 0.74
SHMT1-202ENST00000352886 KCNG2Q9UJ96 466 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 RCE1Q9Y256 329 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 TMEM14AQ9Y6G1 99 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 OR4C45A6NMZ5 311 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 TMEM127O75204 238 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 PNLIPRP2P54317 469 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 GSG1Q2KHT4 349 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 SHISA6Q6ZSJ9 500 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 BTN2A1Q7KYR7 527 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 KANSL1Q7Z3B3 1105 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 OR10AC1Q8NH08 325 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 OR52I2Q8NH67 350 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 SLC41A2Q96JW4 573 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 FOXN4Q96NZ1 517 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 COMMD4Q9H0A8 199 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 STMN3Q9NZ72 180 aa19.7■□□□□ 0.74
SHMT1-202ENST00000352886 SUSD5O60279 629 aa19.69■□□□□ 0.74
SHMT1-202ENST00000352886 HLA-DQA2P01906 255 aa19.69■□□□□ 0.74
SHMT1-202ENST00000352886 HOXD11P31277 338 aaPredicted RBP19.69■□□□□ 0.74
SHMT1-202ENST00000352886 FOXL2P58012 376 aa19.69■□□□□ 0.74
SHMT1-202ENST00000352886 GIMAP1Q8WWP7 306 aa19.69■□□□□ 0.74
SHMT1-202ENST00000352886 S100A16Q96FQ6 103 aaKnown RBP19.69■□□□□ 0.74
SHMT1-202ENST00000352886 SLCO1C1Q9NYB5 712 aa19.69■□□□□ 0.74
SHMT1-202ENST00000352886 CTSFQ9UBX1 484 aa19.69■□□□□ 0.74
SHMT1-202ENST00000352886 TMED7-TICAM2A0A0A6YYA0 188 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 GABARAPH6UMI1 98 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 MT-ATP6P00846 226 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 CALCBP10092 127 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 GLB1P16278 677 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 SGCBQ16585 318 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 FAM69AQ5T7M9 428 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 CD276Q5ZPR3 534 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 LRRTM1Q86UE6 522 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 SLC25A45Q8N413 288 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 OR51A4Q8NGJ6 313 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 OTOSQ8NHW6 89 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 MRI1Q9BV20 369 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 PLEKHA1Q9HB21 404 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 FGF21Q9NSA1 209 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 AKAP7Q9P0M2 348 aaPredicted RBP19.68■□□□□ 0.74
SHMT1-202ENST00000352886 KLHL9Q9P2J3 617 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 FOXJ3Q9UPW0 622 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 MRPS17Q9Y2R5 130 aaKnown RBP19.68■□□□□ 0.74
SHMT1-202ENST00000352886 TMED7Q9Y3B3 224 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 ZNF254O75437 659 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 MAS1P04201 325 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 BCKDHBP21953 392 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 PTH2RP49190 550 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 P2RX1P51575 399 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 POLR2HP52434 150 aaKnown RBP19.68■□□□□ 0.74
SHMT1-202ENST00000352886 RPS15P62841 145 aaKnown RBP19.68■□□□□ 0.74
SHMT1-202ENST00000352886 ACKR1Q16570 336 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 TMEM69Q5SWH9 247 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 TMPRSS12Q86WS5 348 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 PRSS35Q8N3Z0 413 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 ZNF441Q8N8Z8 693 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 BEST4Q8NFU0 473 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 TMEM106AQ96A25 262 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 DACT3Q96B18 629 aaPredicted RBP19.68■□□□□ 0.74
SHMT1-202ENST00000352886 ULBP3Q9BZM4 244 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 KLK11Q9UBX7 282 aa19.68■□□□□ 0.74
SHMT1-202ENST00000352886 TRAV8-7A0A075B6U6 113 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 TMEM212A6NML5 194 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 ZNF593O00488 134 aaPredicted RBP19.67■□□□□ 0.74
SHMT1-202ENST00000352886 GMDSO60547 372 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 SYPP08247 313 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 RAB40ALP0C0E4 278 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 CXCL3P19876 107 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 CENPAP49450 140 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 RAG2P55895 527 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 DMWDQ09019 674 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 SFRP4Q6FHJ7 346 aaPredicted RBP19.67■□□□□ 0.74
SHMT1-202ENST00000352886 OR56B4Q8NH76 319 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 RAB40AQ8WXH6 277 aa19.67■□□□□ 0.74
SHMT1-202ENST00000352886 ZNF501Q96CX3 271 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms