RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CBFBQ13951 182 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 CRMP1Q14194 572 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 INAQ16352 499 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 AGAP7PQ5VUJ5 663 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 MRPL14Q6P1L8 145 aaKnown RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 CBLN3Q6UW01 205 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 C5orf46Q6UWT4 87 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 LINC00696Q6ZRV3 163 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 LANCL3Q6ZV70 420 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 EGFL6Q8IUX8 553 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 LRRC75AQ8NAA5 344 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 APCDD1LQ8NCL9 501 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 OR4F15Q8NGB8 312 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 OR51G2Q8NGK0 314 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 OR5M3Q8NGP4 307 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 OR6S1Q8NH40 331 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 OR5W2Q8NH69 310 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 METTL21AQ8WXB1 218 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 PTP4A1Q93096 173 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 CLIP3Q96DZ5 547 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 WDFY2Q96P53 400 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 AGAP4Q96P64 663 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 IP6K3Q96PC2 410 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 ADOQ96SZ5 270 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 SECISBP2Q96T21 854 aaKnown RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 TEAD3Q99594 435 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 SPSB2Q99619 263 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 HCAR1Q9BXC0 346 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 NMNAT2Q9BZQ4 307 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 CLEC4MQ9H2X3 399 aaPredicted RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 RNF167Q9H6Y7 350 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 FKRPQ9H9S5 495 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 ADGRL4Q9HBW9 690 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 MMP25Q9NPA2 562 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 TXNL4BQ9NX01 149 aaKnown RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 C19orf25Q9UFG5 118 aaPredicted RBP7.38□□□□□ -1.23
CD44-205ENST00000352818 IL20RAQ9UHF4 553 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 ZNF229Q9UJW7 825 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 NOX1Q9Y5S8 564 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 HCFC1P51610 2035 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 HEATR5AQ86XA9 2040 aa7.38□□□□□ -1.23
CD44-205ENST00000352818 TRAV36DV7A0A075B6V5 113 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 PNMA8CA0A1B0GUJ8 204 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 SLC35F4A4IF30 521 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 FAM183AA6NL82 134 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 C12orf71A8MTZ7 269 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 SPRY1O43609 319 aaPredicted RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 NDUFB5O43674 189 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 APOL3O95236 402 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 MT-ATP6P00846 226 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 HLA-DPB1P04440 258 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 CD1AP06126 327 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 CD14P08571 375 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 NOS3P29474 1203 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 S100A5P33763 92 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 ATP6V1E1P36543 226 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 TNFSF10P50591 281 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 RORCP51449 518 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 EMP2P54851 167 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 CASP6P55212 293 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 RPS25P62851 125 aaKnown RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 EGR4Q05215 589 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 AIMP2Q13155 320 aaKnown RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 TRAM1Q15629 374 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 RGS21Q2M5E4 152 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 EMC4Q5J8M3 183 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 SLC35F1Q5T1Q4 408 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 PAPD4Q6PIY7 484 aaKnown RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 SHFQ7M4L6 423 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 FAM122BQ7Z309 247 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 FGD2Q7Z6J4 655 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 CCDC190Q86UF4 302 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 ZBTB46Q86UZ6 589 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 DOLPP1Q86YN1 238 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 PRSS58Q8IYP2 241 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 SYS1Q8N2H4 156 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 ARIH2OSQ8N7S6 290 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 TMEM99Q8N816 258 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 GATSQ8NAP1 163 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 ATP6V1C2Q8NEY4 427 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 STK35Q8TDR2 534 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 SPRYD4Q8WW59 207 aaPredicted RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 GATAD2BQ8WXI9 593 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 SLC25A46Q96AG3 418 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 PPP1R14BQ96C90 147 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 TRMT61AQ96FX7 289 aaKnown RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 MRPL48Q96GC5 212 aaKnown RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 KCTD7Q96MP8 289 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 ERMAPQ96PL5 475 aaPredicted RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 SNX18Q96RF0 628 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 DDOQ99489 341 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 TIMP4Q99727 224 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 ALG8Q9BVK2 526 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 TBL1XR1Q9BZK7 514 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 MED20Q9H944 212 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 SMURF1Q9HCE7 757 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 EXOSC4Q9NPD3 245 aaKnown RBP7.37□□□□□ -1.23
CD44-205ENST00000352818 TRIM36Q9NQ86 728 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 FAIMQ9NVQ4 179 aa7.37□□□□□ -1.23
CD44-205ENST00000352818 PLA2G3Q9NZ20 509 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms