RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 FOXRED1Q96CU9 486 aaPredicted RBP12.09□□□□□ -0.47
IFT88-202ENST00000351808 ZMYND19Q96E35 227 aaPredicted RBP12.09□□□□□ -0.47
IFT88-202ENST00000351808 SMIM8Q96KF7 97 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 CD84Q9UIB8 345 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 MMACHCQ9Y4U1 282 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 SPTBP11277 2137 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 FAM86C2PA6NEL3 165 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 PSMD9O00233 223 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 DCTN6O00399 190 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 DCNP07585 359 aaKnown RBP12.09□□□□□ -0.47
IFT88-202ENST00000351808 ELNP15502 786 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 NAA10P41227 235 aaPredicted RBP12.09□□□□□ -0.47
IFT88-202ENST00000351808 DVL1P1P54792 670 aaPredicted RBP12.09□□□□□ -0.47
IFT88-202ENST00000351808 ODF4Q2M2E3 257 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 ZNF585AQ6P3V2 769 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 TMPRSS12Q86WS5 348 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 NRROSQ86YC3 692 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 SUN3Q8TAQ9 357 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 GAL3ST3Q96A11 431 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 SLC41A3Q96GZ6 507 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 MCHR1Q99705 422 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 RAB33BQ9H082 229 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 PTGES2Q9H7Z7 377 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 RBPJLQ9UBG7 517 aa12.09□□□□□ -0.47
IFT88-202ENST00000351808 FAM221BA6H8Z2 402 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 UNC119BA6NIH7 251 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 CTSLP07711 333 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 ADRA2CP18825 462 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 EFNB2P52799 333 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 CRYBB1P53674 252 aaPredicted RBP12.08□□□□□ -0.47
IFT88-202ENST00000351808 BPIFB3P59826 476 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 LASP1Q14847 261 aaKnown RBP12.08□□□□□ -0.47
IFT88-202ENST00000351808 AGERQ15109 404 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 PPA1Q15181 289 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 ZNF385CQ66K41 422 aaPredicted RBP12.08□□□□□ -0.47
IFT88-202ENST00000351808 RPL22L1Q6P5R6 122 aaKnown RBP12.08□□□□□ -0.47
IFT88-202ENST00000351808 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.08□□□□□ -0.47
IFT88-202ENST00000351808 TAF8Q7Z7C8 310 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 C1QL4Q86Z23 238 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 CARFQ8N187 725 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 GABRG1Q8N1C3 465 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 CLEC1AQ8NC01 280 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 OR6J1Q8NGC5 347 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 OR8D1Q8WZ84 308 aa12.08□□□□□ -0.47
IFT88-202ENST00000351808 SAT2Q96F10 170 aaPredicted RBP12.08□□□□□ -0.47
IFT88-202ENST00000351808 VSX1Q9NZR4 365 aaPredicted RBP12.08□□□□□ -0.47
IFT88-202ENST00000351808 MBLAC1A4D2B0 266 aaPredicted RBP12.08□□□□□ -0.48
IFT88-202ENST00000351808 SOX15O60248 233 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 LRP3O75074 770 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 RAB3DO95716 219 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 AMY2AP04746 511 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 NPPBP16860 134 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 ZNF84P51523 738 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 RGS8P57771 180 aaPredicted RBP12.08□□□□□ -0.48
IFT88-202ENST00000351808 SLC26A5P58743 744 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 SNRPNP63162 240 aaKnown RBP12.08□□□□□ -0.48
IFT88-202ENST00000351808 TAF1CQ15572 869 aaPredicted RBP12.08□□□□□ -0.48
IFT88-202ENST00000351808 KHDC3LQ587J8 217 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 NKAIN2Q5VXU1 208 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 STAC2Q6ZMT1 411 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 KCTD9Q7L273 389 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 CBARPQ8N350 705 aaPredicted RBP12.08□□□□□ -0.48
IFT88-202ENST00000351808 OR5K2Q8NHB8 316 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 TM4SF18Q96CE8 201 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 BCO1Q9HAY6 547 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 SPACA1Q9HBV2 294 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 BCL2L10Q9HD36 194 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 CMC2Q9NRP2 79 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 SLC7A7Q9UM01 511 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 KCNIP3Q9Y2W7 256 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 ADAM18Q9Y3Q7 739 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 C13orf42A0A1B0GVH6 325 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 EREGO14944 169 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 CSN2P05814 226 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 SOX2P48431 317 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 TBPL1P62380 186 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 ACTC1P68032 377 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 ACTA1P68133 377 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 TDGQ13569 410 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 NKPD1Q17RQ9 610 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 SCGB2B2Q4G0G5 96 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 EXOSC6Q5RKV6 272 aaKnown RBP12.08□□□□□ -0.48
IFT88-202ENST00000351808 BPIFB2Q8N4F0 458 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 OR10J5Q8NHC4 309 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 ADAMTS17Q8TE56 1095 aa12.08□□□□□ -0.48
IFT88-202ENST00000351808 SIDT1Q9NXL6 827 aaKnown RBP12.08□□□□□ -0.48
IFT88-202ENST00000351808 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 PAPPA2Q9BXP8 1791 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 IGLV3-16A0A075B6K0 115 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 MSGN1A6NI15 193 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 PRAMEF26H0Y7S4 382 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 PHOX2AO14813 284 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 ALOX12BO75342 701 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 SOD3P08294 240 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 OR8U9P0C7N5 309 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 MAKP20794 623 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 C5AR1P21730 350 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 PSMB6P28072 239 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 PRSS3P35030 304 aa12.07□□□□□ -0.48
IFT88-202ENST00000351808 TMPPEQ6ZT21 453 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms