RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TMEM5Q9Y2B1 443 aa19.3■□□□□ 0.68
SNX3-202ENST00000349379 A0A096LPE4 126 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 A0A1W2PPZ6 126 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 ABCD4O14678 606 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 MAGEA2P43356 314 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 GPR4P46093 362 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 OMPP47874 163 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 DAP3P51398 398 aaKnown RBP19.29■□□□□ 0.68
SNX3-202ENST00000349379 ART1P52961 327 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 RUNX1T1Q06455 604 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 SEC23BQ15437 767 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 ZNF672Q499Z4 452 aaPredicted RBP19.29■□□□□ 0.68
SNX3-202ENST00000349379 FGD3Q5JSP0 725 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 LRFN4Q6PJG9 635 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 SPNS3Q6ZMD2 512 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 DHFR2Q86XF0 187 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 FAM169BQ8N8A8 192 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 OR13C2Q8NGS9 318 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 NEUROG1Q92886 237 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 RADILQ96JH8 1075 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 CLPTM1LQ96KA5 538 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 C1QTNF6Q9BXI9 259 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 TXNIPQ9H3M7 391 aa19.29■□□□□ 0.68
SNX3-202ENST00000349379 TRAV27A0A087WT01 109 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 SH3PXD2BA1X283 911 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 M0R1B8 84 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 TRMUO75648 421 aaKnown RBP19.28■□□□□ 0.68
SNX3-202ENST00000349379 IGHG1P01857 330 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 ZNF133P52736 654 aaPredicted RBP19.28■□□□□ 0.68
SNX3-202ENST00000349379 SMIM11AP58511 58 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 UBE2NP61088 152 aaKnown RBP19.28■□□□□ 0.68
SNX3-202ENST00000349379 SPOCK1Q08629 439 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 TAF11Q15544 211 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 C3orf36Q3SXR2 165 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 PGM2L1Q6PCE3 622 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 RRM2BQ7LG56 351 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 HDDC2Q7Z4H3 204 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 OAFQ86UD1 273 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 ZDHHC21Q8IVQ6 265 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 CDK20Q8IZL9 346 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 NOXO1Q8NFA2 376 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 OR4K5Q8NGD3 323 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 TNFRSF13CQ96RJ3 184 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 ZNF347Q96SE7 839 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 FOXB1Q99853 325 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 THTPAQ9BU02 230 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 MAGIXQ9H6Y5 334 aa19.28■□□□□ 0.68
SNX3-202ENST00000349379 BEX4Q9NWD9 120 aaPredicted RBP19.28■□□□□ 0.68
SNX3-202ENST00000349379 STX18Q9P2W9 335 aaKnown RBP19.28■□□□□ 0.68
SNX3-202ENST00000349379 ZNF503-AS2A6NEH8 195 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 ACOT8O14734 319 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 SEC14L2O76054 403 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 GADD45GO95257 159 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 IGKV3-15P01624 115 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 IGLV1-44P01699 117 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 ACADSP16219 412 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 ZNF26P17031 533 aaPredicted RBP19.27■□□□□ 0.68
SNX3-202ENST00000349379 TUBA1BP68363 451 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 TUBA4AP68366 448 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 SPIBQ01892 262 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 DNAL1Q4LDG9 190 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 TUBA1AQ71U36 451 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 CCDC36Q8IYA8 594 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 OR52J3Q8NH60 311 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 OR51A7Q8NH64 312 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 PIGTQ969N2 578 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 NMD3Q96D46 503 aaKnown RBP19.27■□□□□ 0.68
SNX3-202ENST00000349379 FAM46AQ96IP4 442 aaKnown RBP19.27■□□□□ 0.68
SNX3-202ENST00000349379 MOV10Q9HCE1 1003 aaKnown RBP19.27■□□□□ 0.68
SNX3-202ENST00000349379 POFUT2Q9Y2G5 429 aa19.27■□□□□ 0.68
SNX3-202ENST00000349379 IGHV1-18A0A0C4DH31 117 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 MCIDASD6RGH6 385 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 PTP4A3O75365 173 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 DANCRP0C864 163 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 CTXN1P60606 82 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 TRAP1Q12931 704 aaKnown RBP19.26■□□□□ 0.67
SNX3-202ENST00000349379 BNIP1Q12981 228 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 ZBED5Q49AG3 693 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 HDAC2Q92769 488 aaKnown RBP19.26■□□□□ 0.67
SNX3-202ENST00000349379 POP5Q969H6 163 aaKnown RBP19.26■□□□□ 0.67
SNX3-202ENST00000349379 FBXW5Q969U6 566 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 MCHR2Q969V1 340 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 CCDC124Q96CT7 223 aaKnown RBP19.26■□□□□ 0.67
SNX3-202ENST00000349379 SLC38A2Q96QD8 506 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 KCNK17Q96T54 332 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 CCL19Q99731 98 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 B3GNT2Q9NY97 397 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 ZNF224Q9NZL3 707 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 SIGLEC7Q9Y286 467 aa19.26■□□□□ 0.67
SNX3-202ENST00000349379 USF3Q68DE3 2245 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 MED13LQ71F56 2210 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 GYG2O15488 501 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 DHHO43323 396 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 TMCC2O75069 709 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 QDPRP09417 244 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 CBR1P16152 277 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 RRM2P31350 389 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 HMGA2P52926 109 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 CLRN1P58418 232 aa19.25■□□□□ 0.67
SNX3-202ENST00000349379 RPL27P61353 136 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms