RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TRBV23-1A0A0A0MS06 115 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 RNF222A6NCQ9 220 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 FADS1O60427 444 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 SNAPINO95295 136 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 S100A9P06702 114 aaKnown RBP17■□□□□ 0.31
SCARF1-202ENST00000348987 CSF1P09603 554 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 CSF2RBP32927 897 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 SOX2P48431 317 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 LTBQ06643 244 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 AMZ1Q400G9 498 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 RNF113BQ8IZP6 322 aaKnown RBP17■□□□□ 0.31
SCARF1-202ENST00000348987 C15orf40Q8WUR7 153 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 PHYHIPLQ96FC7 376 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 ZNF559Q9BR84 538 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 TCF7L1Q9HCS4 588 aa17■□□□□ 0.31
SCARF1-202ENST00000348987 A0A1B0GTQ1 180 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 GNB5O14775 395 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 OR2F2O95006 317 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 GRPRP30550 384 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 OR2F1Q13607 317 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 VITQ6UXI7 678 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 TMPRSS11FQ6ZWK6 438 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 PGAP1Q75T13 922 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 FAM122BQ7Z309 247 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 TMPRSS12Q86WS5 348 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 OR2L13Q8N349 312 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 OR4E2Q8NGC2 313 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 PAQR8Q8TEZ7 354 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 PHYHIPQ92561 330 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 RPP25Q9BUL9 199 aaKnown RBP16.99■□□□□ 0.31
SCARF1-202ENST00000348987 FAM25EA8MYX2 175 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 OR2T1O43869 369 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 GPRIN2O60269 458 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 SMIM6P0DI80 62 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 DLSTP36957 453 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 MNDAP41218 407 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 C11orf87Q6NUJ2 197 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 ZCCHC12Q6PEW1 402 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 FBXO4Q9UKT5 387 aa16.99■□□□□ 0.31
SCARF1-202ENST00000348987 C2orf16Q68DN1 1984 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 TRBV23OR9-2A0A075B6M9 112 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 TBC1D3EA0A087X179 549 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 F5H0A9 414 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-202ENST00000348987 CCSO14618 274 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 KCNAB3O43448 404 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 XRCC3O43542 346 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 AKAIN1P0CW23 69 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 PNLIPRP2P54317 469 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 EEF1A1P68104 462 aaKnown RBP16.98■□□□□ 0.31
SCARF1-202ENST00000348987 ZNF345Q14585 488 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 TSC22D1Q15714 1073 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 PLEKHN1Q494U1 663 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-202ENST00000348987 VN1R4Q7Z5H5 301 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 MRPL48Q96GC5 212 aaKnown RBP16.98■□□□□ 0.31
SCARF1-202ENST00000348987 PHPT1Q9NRX4 125 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-202ENST00000348987 MBD2Q9UBB5 411 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 CARHSP1Q9Y2V2 147 aaKnown RBP16.98■□□□□ 0.31
SCARF1-202ENST00000348987 MED31Q9Y3C7 131 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 H3BSH0 61 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 IMPA2O14732 288 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 LYPD3O95274 346 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 CD8AP01732 235 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 MAS1P04201 325 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 HIST1H1CP16403 213 aaKnown RBP16.98■□□□□ 0.31
SCARF1-202ENST00000348987 SEC13P55735 322 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 HYAL4Q2M3T9 481 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 C10orf91Q5T1B1 145 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 GRHL3Q8TE85 626 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 ASB13Q8WXK3 278 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 KXD1Q9BQD3 176 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 TREM1Q9NP99 234 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 TAS2R8Q9NYW2 309 aa16.98■□□□□ 0.31
SCARF1-202ENST00000348987 NPIPA5A0A0B4J1W7 369 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 NPIPA7E9PJI5 369 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 CD1AP06126 327 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 NPIPA8P0DM63 369 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 FOSL1P15407 271 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 FCARP24071 287 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 EFNB2P52799 333 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 LBX1P52954 281 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 ID2Q02363 134 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 HABP2Q14520 560 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-202ENST00000348987 RSPH9Q9H1X1 276 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-202ENST00000348987 FGF22Q9HCT0 170 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 ICAM5Q9UMF0 924 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 ZNF780BQ9Y6R6 833 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 GON4LQ3T8J9 2241 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 ICOSLGO75144 302 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 RPP14O95059 124 aaKnown RBP16.97■□□□□ 0.31
SCARF1-202ENST00000348987 PMS2P2O95744 297 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 IFNGP01579 166 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 C3orf33Q6P1S2 294 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 C5orf46Q6UWT4 87 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 TMEFF1Q8IYR6 380 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 COMMD9Q9P000 198 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 MIOXQ9UGB7 285 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 ETV7Q9Y603 341 aa16.97■□□□□ 0.31
SCARF1-202ENST00000348987 PRR19A6NJB7 356 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 OR2AT4A6NND4 320 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 SLC31A1O15431 190 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms