RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 SMCO4Q9NRQ5 59 aa14.27□□□□□ -0.13
LRP8-202ENST00000347547 DHCR7Q9UBM7 475 aaKnown RBP14.27□□□□□ -0.13
LRP8-202ENST00000347547 TRAV18A0A075B6X5 111 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 ICOSLGO75144 302 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 ZNF432O94892 652 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 FBP1P09467 338 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 ATP1B3P54709 279 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 ZNF234Q14588 700 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 CORO6Q6QEF8 472 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 TMEM205Q6UW68 189 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 SLC39A5Q6ZMH5 540 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 NRROSQ86YC3 692 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 TCEAL8Q8IYN2 117 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 NUS1Q96E22 293 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 MRGPRX3Q96LB0 322 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 NMNAT2Q9BZQ4 307 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 WBP1LQ9NX94 342 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 USP36Q9P275 1121 aaKnown RBP14.26□□□□□ -0.13
LRP8-202ENST00000347547 ZNF107Q9UII5 783 aaPredicted RBP14.26□□□□□ -0.13
LRP8-202ENST00000347547 PLEKHA6Q9Y2H5 1048 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 MYO10Q9HD67 2058 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 A0A0B4J2E0 115 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 A0A1B0GX12 115 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 EFCAB7A8K855 629 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 MCIDASD6RGH6 385 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 SPINT1O43278 529 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 NDUFB2O95178 105 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 RAB3DO95716 219 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 AK1P00568 194 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 TACSTD2P09758 323 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 NFYBP25208 207 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 CERS1P27544 350 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 ABCD3P28288 659 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 SSTP61278 116 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 DPTQ07507 201 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 ALKBH1Q13686 389 aaKnown RBP14.26□□□□□ -0.13
LRP8-202ENST00000347547 CDNFQ49AH0 187 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 ZNF595Q8IYB9 648 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 LINC01555Q8NAE3 123 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 ZSCAN1Q8NBB4 408 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 OR5AK2Q8NH90 309 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 PHOSPHO1Q8TCT1 267 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 ZNRF4Q8WWF5 429 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 FGF13Q92913 245 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 C6orf106Q9H6K1 298 aaPredicted RBP14.26□□□□□ -0.13
LRP8-202ENST00000347547 TRPV4Q9HBA0 871 aa14.26□□□□□ -0.13
LRP8-202ENST00000347547 TCF20Q9UGU0 1960 aaKnown RBP14.26□□□□□ -0.13
LRP8-202ENST00000347547 PTPRSQ13332 1948 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 MYOFQ9NZM1 2061 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 TEX13DA0A0J9YY54 714 aaPredicted RBP14.25□□□□□ -0.13
LRP8-202ENST00000347547 PRR32B1ATL7 298 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 GABRR2P28476 465 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 EFNB2P52799 333 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 RAB33AQ14088 237 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 NR0B2Q15466 257 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 EXOSC6Q5RKV6 272 aaKnown RBP14.25□□□□□ -0.13
LRP8-202ENST00000347547 C1orf53Q5VUE5 145 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 AMZ2Q86W34 360 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 TMEM25Q86YD3 366 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 PAQR4Q8N4S7 273 aaPredicted RBP14.25□□□□□ -0.13
LRP8-202ENST00000347547 NPEPL1Q8NDH3 523 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 DVL3Q92997 716 aaPredicted RBP14.25□□□□□ -0.13
LRP8-202ENST00000347547 ZBTB8AQ96BR9 441 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 IGSF21Q96ID5 467 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 TOX2Q96NM4 488 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 MRPS30Q9NP92 439 aaKnown RBP14.25□□□□□ -0.13
LRP8-202ENST00000347547 LHX6Q9UPM6 363 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 TRAV8-7A0A075B6U6 113 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 CDC40O60508 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
LRP8-202ENST00000347547 UPK3AO75631 287 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 ZNF735P0CB33 412 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 AGAP20933 346 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 PMELP40967 661 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 PRKXP51817 358 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 ISXQ2M1V0 245 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 MST1LQ2TV78 715 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 TMED4Q7Z7H5 227 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 BIVMQ86UB2 503 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 NAA40Q86UY6 237 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 BAP18Q8IXM2 172 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 ZNF561Q8N587 486 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 OR8S1Q8NH09 359 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 KCNE5Q9UJ90 142 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 TBX21Q9UL17 535 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 NOP16Q9Y3C1 178 aaKnown RBP14.25□□□□□ -0.13
LRP8-202ENST00000347547 PCYT1BQ9Y5K3 369 aaPredicted RBP14.25□□□□□ -0.13
LRP8-202ENST00000347547 ENTPD2Q9Y5L3 495 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 IER3IP1Q9Y5U9 82 aa14.25□□□□□ -0.13
LRP8-202ENST00000347547 TRBV6-7A0A0A0MS04 114 aa14.24□□□□□ -0.13
LRP8-202ENST00000347547 P2RX6O15547 441 aa14.24□□□□□ -0.13
LRP8-202ENST00000347547 DNAJB6O75190 326 aa14.24□□□□□ -0.13
LRP8-202ENST00000347547 CD14P08571 375 aa14.24□□□□□ -0.13
LRP8-202ENST00000347547 FAM157CP0CG43 387 aa14.24□□□□□ -0.13
LRP8-202ENST00000347547 ZNF44P15621 663 aa14.24□□□□□ -0.13
LRP8-202ENST00000347547 RCC1P18754 421 aaPredicted RBP14.24□□□□□ -0.13
LRP8-202ENST00000347547 AK4P27144 223 aaPredicted RBP14.24□□□□□ -0.13
LRP8-202ENST00000347547 CAPZA1P52907 286 aa14.24□□□□□ -0.13
LRP8-202ENST00000347547 STARD6P59095 220 aa14.24□□□□□ -0.13
LRP8-202ENST00000347547 COL9A2Q14055 689 aaPredicted RBP14.24□□□□□ -0.13
LRP8-202ENST00000347547 GFOD2Q3B7J2 385 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms