RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 RABL2AQ9UBK7 228 aaPredicted RBP10□□□□□ -0.81
CLCN6-202ENST00000346436 RABL2BQ9UNT1 228 aa10□□□□□ -0.81
CLCN6-202ENST00000346436 OR2AT4A6NND4 320 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 C21orf140B9A014 251 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 CD160O95971 181 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 SHC1P29353 583 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 RAB13P51153 203 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 PPP2CBP62714 309 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 PPP2CAP67775 309 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 POU4F3Q15319 338 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 OR5AK2Q8NH90 309 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 CASTOR1Q8WTX7 329 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 ACOT11Q8WXI4 607 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-202ENST00000346436 BPIFA2Q96DR5 249 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 NT5DC2Q9H857 520 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 GALNT9Q9HCQ5 603 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 KIAA1456Q9P272 454 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 CACNG2Q9Y698 323 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 IGHV1OR15-9A0A0B4J2B8 117 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 GTF2F2P13984 249 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 OPRD1P41143 372 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 CCR2P41597 374 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 SF3A2Q15428 464 aaKnown RBP9.99□□□□□ -0.81
CLCN6-202ENST00000346436 FAHD1Q6P587 224 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 NLRP8Q86W28 1048 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 MAML2Q8IZL2 1156 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-202ENST00000346436 OR2T35Q8NGX2 323 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 LILRB4Q8NHJ6 448 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 NRTNQ99748 197 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 GABARAPL3Q9BY60 117 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 C12orf4Q9NQ89 552 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF443Q9Y2A4 671 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-202ENST00000346436 M0R082 166 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 HMGN4O00479 90 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 CTSLP07711 333 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 GPR85P60893 370 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 PUDPQ08623 228 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 FAM111BQ6SJ93 734 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 KCTD9Q7L273 389 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 SSX8Q7RTT4 187 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 SMAP2Q8WU79 429 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-202ENST00000346436 FOXRED1Q96CU9 486 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-202ENST00000346436 UBL7Q96S82 380 aaPredicted RBP9.99□□□□□ -0.81
CLCN6-202ENST00000346436 MKRN2Q9H000 416 aaKnown RBP9.99□□□□□ -0.81
CLCN6-202ENST00000346436 P4HTMQ9NXG6 502 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 CCDC163A0A0D9SF12 145 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 C13orf42A0A1B0GVH6 325 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 PRAMEF27A3QJZ7 478 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF732B4DXR9 585 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 PPM1DO15297 605 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 TMPRSS11DO60235 418 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 SLC2A10O95528 541 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 SERPINE2P07093 398 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 CPT2P23786 658 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 TRIM23P36406 574 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 NXPH1P58417 271 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 FXYD6P3P58550 94 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 SELENBP1Q13228 472 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 PRR18Q8N4B5 295 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 STEAP2Q8NFT2 490 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 TBC1D29Q9UFV1 150 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 OR51B4Q9Y5P0 310 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 KANTRA0A1W2PQU2 76 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 K7EQS6 105 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 FABP1P07148 127 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 RPS5P46782 204 aaKnown RBP9.99□□□□□ -0.81
CLCN6-202ENST00000346436 SQSTM1Q13501 440 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 NKAIN4Q8IVV8 208 aa9.99□□□□□ -0.81
CLCN6-202ENST00000346436 HRO43593 1189 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 SLC16A7O60669 478 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 SNRPBP14678 240 aaKnown RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 NDUFB7P17568 137 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 ITGB8P26012 769 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 BMI1P35226 326 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 WNT3P56703 355 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 CLDN12P56749 244 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 PPA1Q15181 289 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 PLK5Q496M5 336 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 SYT14P1Q58G82 188 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 YRDCQ86U90 279 aaKnown RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 OR4D9Q8NGE8 314 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 UPRTQ96BW1 309 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 CCDC120Q96HB5 630 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 SLIRPQ9GZT3 109 aaKnown RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 RAB1BQ9H0U4 201 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 RANBP3Q9H6Z4 567 aaPredicted RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 MAB21L2Q9Y586 359 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 TOX3O15405 576 aaPredicted RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 SSX4O60224 188 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 RBBP9O75884 186 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 NXPH2O95156 264 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 UCHL1P09936 223 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 TNFRSF1AP19438 455 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 TRHRP34981 398 aaPredicted RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 LIM2P55344 173 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 ERVK-25P63136 954 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 OR1Q1Q15612 314 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 BAHD1Q8TBE0 780 aaPredicted RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 RTL8AQ9BWD3 113 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 IL21Q9HBE4 155 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms