RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TFP02787 698 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 JMJD7P0C870 316 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 CELP19835 753 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 RPS19P39019 145 aaKnown RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 RPS18P62269 152 aaKnown RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 INSM1Q01101 510 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 FABP5Q01469 135 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF85Q03923 595 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 C17orf67Q0P5P2 114 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ATP1A4Q13733 1029 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 SFRP5Q5T4F7 317 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 DCAF12Q5T6F0 453 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 VASNQ6EMK4 673 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 C22orf42Q6IC83 251 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 GDPGP1Q6ZNW5 385 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 SSX6Q7RTT6 188 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 NUP54Q7Z3B4 507 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 KRT77Q7Z794 578 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 MISPQ8IVT2 679 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ELMOD2Q8IZ81 293 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 OR2Y1Q8NGV0 311 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 RNF138Q8WVD3 245 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 C1GALT1C1Q96EU7 318 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 IMMP1LQ96LU5 166 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 DACH2Q96NX9 599 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 TSPAN32Q96QS1 320 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 RASL10BQ96S79 203 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 DCLRE1CQ96SD1 692 aaKnown RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 C6orf62Q9GZU0 229 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 NXF2Q9GZY0 626 aaKnown RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF700Q9H0M5 742 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 FKRPQ9H9S5 495 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 HAO2Q9NYQ3 351 aa8.33□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF346Q9UL40 294 aaKnown RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 CAB39Q9Y376 341 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 SIRT4Q9Y6E7 314 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-202ENST00000345734 A0A1W2PQL4 384 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 CLDN25C9JDP6 229 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF670-ZNF695F2Z2N8 137 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 H7C1C5 153 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 NPIPB7O75200 414 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 HIST1H2ABP04908 130 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 SPI1P17947 270 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 NAA10P41227 235 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 TGM4P49221 684 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 LCN6P62502 163 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 GALEQ14376 348 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 INSL4Q14641 139 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 ZNF846Q147U1 533 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 INPP5JQ15735 1006 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 STK11Q15831 433 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 ISXQ2M1V0 245 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 TMPRSS11AQ6ZMR5 421 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 LHFPL2Q6ZUX7 228 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 HIST3H2AQ7L7L0 130 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 RAB11FIP2Q7L804 512 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 TIPARPQ7Z3E1 657 aaKnown RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 ARL6IP6Q8N6S5 226 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 SYT14Q8NB59 555 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 ATP6V1C2Q8NEY4 427 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 SLC22A8Q8TCC7 542 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 HIST1H2ACQ93077 130 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 TSSK2Q96PF2 358 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 TMED9Q9BVK6 235 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 BARHL1Q9BZE3 327 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 NMNAT2Q9BZQ4 307 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 OR2B2Q9GZK3 357 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 MMP27Q9H306 513 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 SP140LQ9H930 580 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 TAS2R5Q9NYW4 299 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 AKAP7Q9P0M2 348 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 PISDQ9UG56 409 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 VDAC3Q9Y277 283 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 CELSR3Q9NYQ7 3312 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 DOCK10Q96BY6 2186 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 OTOGLQ3ZCN5 2332 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 FREM3P0C091 2139 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 A0A1W2PNU3 283 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 A8MVM7 634 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 E9PI62 339 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 C11orf98E9PRG8 122 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 MAGEB4O15481 346 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 AKAP8O43823 692 aaKnown RBP8.32□□□□□ -1.08
ATG4A-202ENST00000345734 SELENOFO60613 162 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 ITGA10O75578 1167 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 CDRT1O95170 752 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 CLEC2LP0C7M8 214 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 IL11P20809 199 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 GRPRP30550 384 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 SDHAP31040 664 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 GABRA5P31644 462 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 PYCR1P32322 319 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 FOLR3P41439 243 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 S100A12P80511 92 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 MXD1Q05195 221 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 ACSM1Q08AH1 577 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 NTRK2Q16620 822 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 MESTQ5EB52 335 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 C1orf140Q5VVS0 124 aa8.32□□□□□ -1.08
ATG4A-202ENST00000345734 LINC00299Q6ZSB3 139 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms