RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 NRSN1Q8IZ57 195 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 LINC00469Q8N7U9 141 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 RPL3LQ92901 407 aaKnown RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 FAM210BQ96KR6 192 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ZNF599Q96NL3 588 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 STACQ99469 402 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 CRTAC1Q9NQ79 661 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 MED1Q15648 1581 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 ADAMTSL1Q8N6G6 1762 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 USP31Q70CQ4 1352 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 I6L893 689 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 PIRO00625 290 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 GPR37O15354 613 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ZNF354AO60765 605 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 GBAP04062 536 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 GABRB1P18505 474 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR10J1P30954 320 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TAS2R45P59539 299 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OC90Q02509 493 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 CYP27C1Q4G0S4 372 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ZNF385BQ569K4 471 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 Q6ZTK2 550 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR2L13Q8N349 312 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 FAM169BQ8N8A8 192 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR9A2Q8NGT5 310 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 FBXW5Q969U6 566 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 MS4A4EQ96PG1 132 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 DPH2Q9BQC3 489 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 NAA11Q9BSU3 229 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 ACTR3CQ9C0K3 210 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 B4GALT7Q9UBV7 327 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 RNF11Q9Y3C5 154 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 C9J4A7 227 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 RAB27BO00194 218 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 HAS3O00219 553 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 PLSCR1O15162 318 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 PPM1DO15297 605 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 NCR1O76036 304 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ADH4P08319 380 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 EPXP11678 715 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 IVDP26440 423 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 GNG4P50150 75 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 SSX1Q16384 188 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 FAM117BQ6P1L5 589 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 C6orf120Q7Z4R8 191 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR4K14Q8NGD5 310 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR52P1PQ8NH57 321 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR1L3Q8NH93 324 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 CD200R1Q8TD46 325 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 NETO1Q8TDF5 533 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 FAM151AQ8WW52 585 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OIT3Q8WWZ8 545 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 HDAC8Q9BY41 377 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 GPR61Q9BZJ8 451 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR2J1Q9GZK6 312 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ZNF385DQ9H6B1 395 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 FKRPQ9H9S5 495 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ZNF337Q9Y3M9 751 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 GAGE10A6NGK3 116 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 B4DEV8 164 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 GPR171O14626 319 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 AKR7A3O95154 331 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 CRABP1P29762 137 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ELLP55199 621 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 IL24Q13007 206 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 GAB4Q2WGN9 574 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 PGGHGQ32M88 737 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 HENMT1Q5T8I9 393 aaKnown RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 AGBL4Q5VU57 503 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 NADSYN1Q6IA69 706 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ANKRD16Q6P6B7 361 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR9Q2Q8NGE9 314 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR14A16Q8NHC5 309 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 NDUFB11Q9NX14 153 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 GDF2Q9UK05 429 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 TIMM13Q9Y5L4 95 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 LIPGQ9Y5X9 500 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TGIF2-C20orf24A0A0A6YYL0 155 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 SEMA4FO95754 770 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ATP1B1P05026 303 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 CD82P27701 267 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 MTNR1BP49286 362 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 BACE1P56817 501 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 WDR5P61964 334 aaKnown RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 FAM209AQ5JX71 171 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 ZNF787Q6DD87 383 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TMEM107Q6UX40 140 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 OR6K3Q8NGY3 331 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 CAPNS2Q96L46 248 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 NSUN3Q9H649 340 aaKnown RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 ALKBH4Q9NXW9 302 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 RASL12Q9NYN1 266 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 PAM16Q9Y3D7 125 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 DIP2BQ9P265 1576 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 COL1A2P08123 1366 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 LOC102725191A0A1B0GVB3 256 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 TTC24A2A3L6 582 aaPredicted RBP5.74□□□□□ -1.49
VCAN-203ENST00000343200 FAM227AF5H4B4 570 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 PEX12O00623 359 aa5.74□□□□□ -1.49
VCAN-203ENST00000343200 SEMA7AO75326 666 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms