RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
COL18A1-201ENST00000342220 MBOAT2Q6ZWT7 520 aa11.87□□□□□ -0.51
COL18A1-201ENST00000342220 KMT5CQ86Y97 462 aa11.87□□□□□ -0.51
COL18A1-201ENST00000342220 SPRYD4Q8WW59 207 aaPredicted RBP11.87□□□□□ -0.51
COL18A1-201ENST00000342220 KIAA1143Q96AT1 154 aaPredicted RBP11.87□□□□□ -0.51
COL18A1-201ENST00000342220 ZMYND19Q96E35 227 aaPredicted RBP11.87□□□□□ -0.51
COL18A1-201ENST00000342220 ZC3H10Q96K80 434 aaKnown RBP11.87□□□□□ -0.51
COL18A1-201ENST00000342220 C5orf34Q96MH7 638 aa11.87□□□□□ -0.51
COL18A1-201ENST00000342220 PELOQ9BRX2 385 aaKnown RBP11.87□□□□□ -0.51
COL18A1-201ENST00000342220 TINAGL1Q9GZM7 467 aaPredicted RBP11.87□□□□□ -0.51
COL18A1-201ENST00000342220 NSG1A0A0A6YYJ2 146 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 OR6A2O95222 327 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 NGFRP08138 427 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 ZCCHC12Q6PEW1 402 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 ARIH2OSQ8N7S6 290 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 NEIL3Q8TAT5 605 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 RASD2Q96D21 266 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 UBQLN3Q9H347 655 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 NLKQ9UBE8 527 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 MGAT4AQ9UM21 535 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 SURF4O15260 269 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 FABP7O15540 132 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 FLRT2O43155 660 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 SULT1B1O43704 296 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 TNFSF15O95150 251 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 HLA-DMAP28067 261 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 FOLR3P41439 243 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 ZNF117Q03924 483 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 AADACL4Q5VUY2 407 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 C17orf107Q6ZR85 190 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 LINC00696Q6ZRV3 163 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 ADGRG3Q86Y34 549 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 POGLUT1Q8NBL1 392 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 HS6ST2Q96MM7 605 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 ZNF285Q96NJ3 590 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 SPSB2Q99619 263 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 NPAS1Q99742 590 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 CDCP1Q9H5V8 836 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 AUP1Q9Y679 476 aa11.86□□□□□ -0.51
COL18A1-201ENST00000342220 A0A1W2PPK0 400 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 GP1BBP13224 206 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 SSTR2P30874 369 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 KLBQ86Z14 1044 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 SOSTQ9BQB4 213 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 ZNF649Q9BS31 505 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 CDX4O14627 284 aaPredicted RBP11.85□□□□□ -0.51
COL18A1-201ENST00000342220 TRAPPC6AO75865 159 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 S100A6P06703 90 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 THBS1P07996 1170 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 EVX1P49640 407 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 CTBP2P56545 445 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 PLAURQ03405 335 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 EXOSC2Q13868 293 aaKnown RBP11.85□□□□□ -0.51
COL18A1-201ENST00000342220 CRMP1Q14194 572 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 COL28A1Q2UY09 1125 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 VASNQ6EMK4 673 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 ULK3Q6PHR2 472 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 CCDC36Q8IYA8 594 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 ZNF524Q96C55 264 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 RNF32Q9H0A6 362 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 CLEC4MQ9H2X3 399 aaPredicted RBP11.85□□□□□ -0.51
COL18A1-201ENST00000342220 FAM240BA0A1B0GVZ2 78 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 RIIAD1A6NNX1 92 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 HCN1O60741 890 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 ITGA10O75578 1167 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 RRASP10301 218 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 ACAA2P42765 397 aaKnown RBP11.85□□□□□ -0.51
COL18A1-201ENST00000342220 GPR143P51810 404 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 ATP1A1-AS1Q5TC04 95 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 TRILQ7L0X0 811 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 CXXC5Q7LFL8 322 aaKnown RBP11.85□□□□□ -0.51
COL18A1-201ENST00000342220 KLHL36Q8N4N3 616 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 SLC37A3Q8NCC5 494 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 MOSPD2Q8NHP6 518 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 RFKQ969G6 155 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 KTI12Q96EK9 354 aaPredicted RBP11.85□□□□□ -0.51
COL18A1-201ENST00000342220 MOGAT1Q96PD6 335 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 NMNAT3Q96T66 252 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 LMF2Q9BU23 707 aaKnown RBP11.85□□□□□ -0.51
COL18A1-201ENST00000342220 HCAR1Q9BXC0 346 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 ISG20L2Q9H9L3 353 aaKnown RBP11.85□□□□□ -0.51
COL18A1-201ENST00000342220 RBFOX1Q9NWB1 397 aaKnown RBP11.85□□□□□ -0.51
COL18A1-201ENST00000342220 PPP4R1LQ9P1A2 415 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 DOCK7Q96N67 2140 aa11.85□□□□□ -0.51
COL18A1-201ENST00000342220 SPTAN1Q13813 2472 aaKnown RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 LYRM1O43325 122 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 HLA-DPB1P04440 258 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 PYCR1P32322 319 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 BAMBIQ13145 260 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 GPALPP1Q8IXQ4 340 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 OSTF1Q92882 214 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 UPRTQ96BW1 309 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 PRSS27Q9BQR3 290 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 HINT3Q9NQE9 182 aaKnown RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 C19orf25Q9UFG5 118 aaPredicted RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 LRP4O75096 1905 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 AKAP8O43823 692 aaKnown RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 ZFAND5O76080 213 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 RAF1P04049 648 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 ITGA3P26006 1051 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms